Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00054 ATGCATGAGATCACGATATCAACAAGCGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCCTGCTGTCTGAAACTGGGTTGAATATCCAAGAAGCACATGCTTTTTCAACCTTGGATGGTTATTCATTGGATGTTTTTGTTGTTTGTGGTTGGCCTGTTGAGGAGACTGAAAAGCTTAAACATGTGCTGACCAAACAAATTCAGAAACTTGAGCAGCAGCCTTCCATGAAGAAAATTGGCAGTCAAACTGCAGAGCAAGAACAAATCAGGATGAATTTTATCTCTAACAATGTGAATCTACCTTTATGTGGAAGTGTTGCCTGGGAAGTTGATGCAAGCAGTTTGAAATATGAAAGGAAAATTGCATCTGGACCGTTCTTTGATTTGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTCAAGACTGAGAATCTGAACGAAAATATGCAAAGGGAGTTTTCTCAAGAGGTCTATATTCTGAGTAAATTGTGTCACAAGAATGTTGTGAAATTTTTAGGGGCTAGTACAAAACTTCCAGACCTATTCATTGTCACAGAATACATGTGTGGTGGAAGTCTGTATGAGTTTCTGCATACACAGAAGGTTGTGCTTACTCTTCCATATTTGATCAAAGTGGCAATAAATGTTTGCGAAGGAATGAAGTATTTGCATCAGAATGAAATCATACACAGGGACCTTAAAGCTGCGAATCTTTTGATGGATGAGAATGGGGTAGTGAAGGTTGCTGATTTTGGTGTAGCAAGGGTGGAAGATGAGTCAGGCATTATGACTGCAGAAACTGGAACTTATAGATGGATGGCTCCAGAGGTTATTGAACATAGACCATATAATCACAAAGCCGATGTGTTCAGTTTTGGAATTACTATGTGGGAGCTGCTCACAGGAAAGCTTCCACATGAGCATTTGTCACCATTGCAAGCAGCTGTTGGAGTGGTCCAGAAGGGGTTGAGGCCCAAAATTCCGAGACAGACGCATCCAATGTTAGTAGAGCTGATGAACCATTGCTGGCACCAAAACCCTTCTTTGAGACCCGAATTCTCAGAAATTCTGGAATCTCTCCACCATTTTTCCCAGGATGTTGCAGGCGAAGCTGCCACTGACGCCAGAAGAGACAACGTATAG 1155 0.4139 MHEITISTSDKPKLLSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVCGWPVEETEKLKHVLTKQIQKLEQQPSMKKIGSQTAEQEQIRMNFISNNVNLPLCGSVAWEVDASSLKYERKIASGPFFDLYKGVFCNQEVAIKVLKTENLNENMQREFSQEVYILSKLCHKNVVKFLGASTKLPDLFIVTEYMCGGSLYEFLHTQKVVLTLPYLIKVAINVCEGMKYLHQNEIIHRDLKAANLLMDENGVVKVADFGVARVEDESGIMTAETGTYRWMAPEVIEHRPYNHKADVFSFGITMWELLTGKLPHEHLSPLQAAVGVVQKGLRPKIPRQTHPMLVELMNHCWHQNPSLRPEFSEILESLHHFSQDVAGEAATDARRDNV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00054 384 SMART serkin_6 115 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00054 384 CDD STKc_MAP3K-like 121 364 - -
Accr3g00054 384 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 371 - -
Accr3g00054 384 SUPERFAMILY Protein kinase-like (PK-like) 97 364 IPR011009 -
Accr3g00054 384 SUPERFAMILY ACT-like 2 77 IPR045865 -
Accr3g00054 384 Coils Coil 53 73 - -
Accr3g00054 384 Gene3D - 1 78 - -
Accr3g00054 384 ProSiteProfiles Protein kinase domain profile. 115 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00054 384 Gene3D Transferase(Phosphotransferase) domain 1 194 383 - -
Accr3g00054 384 Coils Coil 136 156 - -
Accr3g00054 384 FunFam Kinase suppressor of Ras 1 105 192 - -
Accr3g00054 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Accr3g00054 384 Pfam Protein tyrosine and serine/threonine kinase 115 364 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 PRINTS Tyrosine kinase catalytic domain signature 335 357 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 PRINTS Tyrosine kinase catalytic domain signature 226 244 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 PRINTS Tyrosine kinase catalytic domain signature 272 282 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 PRINTS Tyrosine kinase catalytic domain signature 291 313 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 PRINTS Tyrosine kinase catalytic domain signature 189 202 IPR001245 GO:0004672|GO:0006468
Accr3g00054 384 Gene3D Phosphorylase Kinase; domain 1 104 193 - -
Accr3g00054 384 ProSiteProfiles ACT domain profile. 3 81 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00054 Accr-Chr3 726459 735147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00054 1 371 MAP Kinase Kinase Kinase AT2G17700 62.534 2.72e-172 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr3g00054 PK_Tyr_Ser-Thr 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00054 - - gmx:100818047 534.643