Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00053 ATGGGAGACACAGAGAGTTGCAGTAACAGGGGTCAGAATTCAGGGTGGAATAATAGTCGAAAGCAAAATCAAAAGGTTGAAGTTTTCAACGAAGTTCTTAGTAGACTTAAGGAATTGAATGTCTCAGAGGCTACGGATCCTGACTTTGAAGTGGAGCTCTGGACGCATTTCCATCGACTTCCAGCTAGGTATGCAGTGGATATGAATGTGGAGAGAGCTCAAGACGTCATTATGCATAAAAAGTTGATGCATATGGCACATGATCCTGCTACCAGACCTGCTGTTGAAGTCCGTCTTGTTCAGGTTCGATCATCTTCAGGTGTGAATTCTAGTGATTCCCTTCATTCAAACTCACAAAGAAAAGTCAGTCGTCAAGAATCTCATAATACAGGCAACATGAGCATTCATCCTGCTCCAGCCTTCGGTTCCTCAGCTAACTTTGAACTTGCGCTTGAAGCAAGCCAGTTAAAAGTTCAATCTAATAATGGAAATTCGAAATTCTATACACAACCAATGCATGAGATCACGATATCAACAAGCGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCCTGCTGTCTGAAACTGGGTTGAATATCCAAGAAGCACATGCTTTTTCAACCTTGGATGGTTATTCATTGGATGTTTTTGTTGTTTGTGGTTGGCCTGTTGAGGAGACTGAAAAGCTTAAACATGTGCTGACCAAACAAATTCAGAAACTTGAGCAGCCTTCCATGAAGAAAATTGGCAGTCAAACTGCAGAGCAAGAACAAATCAGGATGAATTTTATCTCTAACAATGTGAATCTACCTTTATGTGGAAGTGTTGCCTGGGAAGTTGATGCAAGCAGTTTGAAATATGAAAGGAAAATTGCATCTGGACCGTTCTTTGATTTGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTCAAGACTGAGAATCTGAACGAAAATATGCAAAGGGAGTTTTCTCAAGAGGTCTATATTCTGAGTAAATTGTGTCACAAGAATGTTGTGAAATTTTTAGGGGCTAGTACAAAACTTCCAGACCTATTCATTGTCACAGAATACATGTGTGGTGGAAGTCTGTATGAGTTTCTGCATACACAGAAGGTTGTGCTTACTCTTCCATATTTGATCAAAGTGGCAATAAATGTTTGCGAAGGAATGAAGTATTTGCATCAGAATGAAATCATACACAGGGACCTTAAAGCTGCGAATCTTTTGATGGATGAGAATGGGGTAGTGAAGGTTGCTGATTTTGGTGTAGCAAGGGTGGAAGATGAGTCAGGCATTATGACTGCAGAAACTGGAACTTATAGATGGATGGCTCCAGAGGTTATTGAACATAGACCATATAATCACAAAGCCGATGTGTTCAGTTTTGGAATTACTATGTGGGAGCTGCTCACAGGAAAGCTTCCACATGAGCATTTGTCACCATTGCAAGCAGCTGTTGGAGTGGTCCAGAAGGGGTTGAGGCCCAAAATTCCGAGACAGACGCATCCAATGTTAGTAGAGCTGATGAACCATTGCTGGCACCAAAACCCTTCTTTGAGACCCGAATTCTCAGAAATTCTGGAATCTCTCCACCATTTTTCCCAGGATGTTGCAGGCGAAGCTGCCACTGACGCCAGAAGAGACAACGTATAG 1665 0.4156 MGDTESCSNRGQNSGWNNSRKQNQKVEVFNEVLSRLKELNVSEATDPDFEVELWTHFHRLPARYAVDMNVERAQDVIMHKKLMHMAHDPATRPAVEVRLVQVRSSSGVNSSDSLHSNSQRKVSRQESHNTGNMSIHPAPAFGSSANFELALEASQLKVQSNNGNSKFYTQPMHEITISTSDKPKLLSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVCGWPVEETEKLKHVLTKQIQKLEQPSMKKIGSQTAEQEQIRMNFISNNVNLPLCGSVAWEVDASSLKYERKIASGPFFDLYKGVFCNQEVAIKVLKTENLNENMQREFSQEVYILSKLCHKNVVKFLGASTKLPDLFIVTEYMCGGSLYEFLHTQKVVLTLPYLIKVAINVCEGMKYLHQNEIIHRDLKAANLLMDENGVVKVADFGVARVEDESGIMTAETGTYRWMAPEVIEHRPYNHKADVFSFGITMWELLTGKLPHEHLSPLQAAVGVVQKGLRPKIPRQTHPMLVELMNHCWHQNPSLRPEFSEILESLHHFSQDVAGEAATDARRDNV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00053 554 SUPERFAMILY Protein kinase-like (PK-like) 267 534 IPR011009 -
Accr3g00053 554 SUPERFAMILY ACT-like 172 242 IPR045865 -
Accr3g00053 554 Gene3D - 171 243 - -
Accr3g00053 554 Pfam Protein tyrosine and serine/threonine kinase 285 534 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 FunFam Kinase suppressor of Ras 1 275 362 - -
Accr3g00053 554 Gene3D Transferase(Phosphotransferase) domain 1 364 553 - -
Accr3g00053 554 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 541 - -
Accr3g00053 554 ProSiteProfiles Protein kinase domain profile. 285 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00053 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Accr3g00053 554 Coils Coil 306 326 - -
Accr3g00053 554 Gene3D Phosphorylase Kinase; domain 1 274 363 - -
Accr3g00053 554 MobiDBLite consensus disorder prediction 106 137 - -
Accr3g00053 554 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g00053 554 CDD STKc_MAP3K-like 291 534 - -
Accr3g00053 554 SMART serkin_6 285 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00053 554 PRINTS Tyrosine kinase catalytic domain signature 505 527 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Accr3g00053 554 ProSiteProfiles ACT domain profile. 174 254 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00053 Accr-Chr3 724965 735147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00053 3 541 MAP Kinase Kinase Kinase AT2G17700 55.801 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr3g00053 PK_Tyr_Ser-Thr 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00053 - - gmx:100818047 726.857