Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00052 ATGGGAGACACAGAGAGTTGCAGTAACAGGGGTCAGAATTCAGGGTGGAATAATAGTCGAAAGCAAAATCAAAAGGTTGAAGTTTTCAACGAAGTTCTTAGTAGACTTAAGGAATTGAATGTCTCAGAGGCTACGGATCCTGACTTTGAAGTGGAGCTCTGGACGCATTTCCATCGACTTCCAGCTAGGTATGCAGTGGATATGAATGTGGAGAGAGCTCAAGACGTCATTATGCATAAAAAGTTGATGCATATGGCACATGATCCTGCTACCAGACCTGCTGTTGAAGTCCGTCTTGTTCAGGTTCGATCATCTTCAGGTGTGAATTCTAGTGATTCCCTTCATTCAAACTCACAAAGAAAAGTCAGTCGTCAAGAATCTCATAATACAGGCAACATGAGCATTCATCCTGCTCCAGCCTTCGGTTCCTCAGCTAACTTTGAACTTGCGCTTGAAGCAAGCCAGTTAAAAGTTCAATCTAATAATGGAAATTCGAAATTCTATACACAACCAATGCATGAGATCACGATATCAACAAGCGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCCTGCTGTCTGAAACTGGGTTGAATATCCAAGAAGCACATGCTTTTTCAACCTTGGATGGTTATTCATTGGATGTTTTTGTTGTTTGTGGTTGGCCTGTTGAGGAGACTGAAAAGCTTAAACATGTGCTGACCAAACAAATTCAGAAACTTGAGCAGCAGCCTTCCATGAAGAAAATTGGCAGTCAAACTGCAGAGCAAGAACAAATCAGGATGAATTTTATCTCTAACAATGTGAATCTACCTTTATGTGGAAGTGTTGCCTGGGAAGTTGATGCAAGCAGTTTGAAATATGAAAGGAAAATTGCATCTGGACCGTTCTTTGATTTGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTCAAGACTGAGAATCTGAACGAAAATATGCAAAGGGAGTTTTCTCAAGAGGTCTATATTCTGAGTAAATTGTGTCACAAGAATGTTGTGAAATTTTTAGGGGCTAGTACAAAACTTCCAGACCTATTCATTGTCACAGAATACATGTGTGGTGGAAGTCTGTATGAGTTTCTGCATACACAGAAGGTTGTGCTTACTCTTCCATATTTGATCAAAGTGGCAATAAATGTTTGCGAAGGAATGAAGTATTTGCATCAGAATGAAATCATACACAGGGACCTTAAAGCTGCGAATCTTTTGATGGATGAGAATGGGGTAGTGAAGGTTGCTGATTTTGGTGTAGCAAGGGTGGAAGATGAGTCAGGCATTATGACTGCAGAAACTGGAACTTATAGATGGATGGCTCCAGAGGTTATTGAACATAGACCATATAATCACAAAGCCGATGTGTTCAGTTTTGGAATTACTATGTGGGAGCTGCTCACAGGAAAGCTTCCACATGAGCATTTGTCACCATTGCAAGCAGCTGTTGGAGTGGTCCAGAAGGGGTTGAGGCCCAAAATTCCGAGACAGACGCATCCAATGTTAGTAGAGCTGATGAACCATTGCTGGCACCAAAACCCTTCTTTGAGACCCGAATTCTCAGAAATTCTGGAATCTCTCCACCATTTTTCCCAGGATGTTGCAGGCGAAGCTGCCACTGACGCCAGAAGAGACAACGTATAG 1668 0.4161 MGDTESCSNRGQNSGWNNSRKQNQKVEVFNEVLSRLKELNVSEATDPDFEVELWTHFHRLPARYAVDMNVERAQDVIMHKKLMHMAHDPATRPAVEVRLVQVRSSSGVNSSDSLHSNSQRKVSRQESHNTGNMSIHPAPAFGSSANFELALEASQLKVQSNNGNSKFYTQPMHEITISTSDKPKLLSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVCGWPVEETEKLKHVLTKQIQKLEQQPSMKKIGSQTAEQEQIRMNFISNNVNLPLCGSVAWEVDASSLKYERKIASGPFFDLYKGVFCNQEVAIKVLKTENLNENMQREFSQEVYILSKLCHKNVVKFLGASTKLPDLFIVTEYMCGGSLYEFLHTQKVVLTLPYLIKVAINVCEGMKYLHQNEIIHRDLKAANLLMDENGVVKVADFGVARVEDESGIMTAETGTYRWMAPEVIEHRPYNHKADVFSFGITMWELLTGKLPHEHLSPLQAAVGVVQKGLRPKIPRQTHPMLVELMNHCWHQNPSLRPEFSEILESLHHFSQDVAGEAATDARRDNV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00052 555 ProSiteProfiles Protein kinase domain profile. 286 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00052 555 SUPERFAMILY ACT-like 172 248 IPR045865 -
Accr3g00052 555 CDD STKc_MAP3K-like 292 535 - -
Accr3g00052 555 Coils Coil 224 244 - -
Accr3g00052 555 SMART serkin_6 286 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00052 555 Coils Coil 307 327 - -
Accr3g00052 555 ProSiteProfiles ACT domain profile. 174 252 IPR002912 -
Accr3g00052 555 Gene3D - 171 248 - -
Accr3g00052 555 MobiDBLite consensus disorder prediction 106 137 - -
Accr3g00052 555 FunFam Kinase suppressor of Ras 1 276 363 - -
Accr3g00052 555 Gene3D Phosphorylase Kinase; domain 1 275 364 - -
Accr3g00052 555 PRINTS Tyrosine kinase catalytic domain signature 443 453 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 PRINTS Tyrosine kinase catalytic domain signature 360 373 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Accr3g00052 555 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g00052 555 Pfam Protein tyrosine and serine/threonine kinase 286 535 IPR001245 GO:0004672|GO:0006468
Accr3g00052 555 Gene3D Transferase(Phosphotransferase) domain 1 365 554 - -
Accr3g00052 555 SUPERFAMILY Protein kinase-like (PK-like) 268 535 IPR011009 -
Accr3g00052 555 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00052 Accr-Chr3 724965 735147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00052 3 542 MAP Kinase Kinase Kinase AT2G17700 55.801 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr3g00052 PK_Tyr_Ser-Thr 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00052 - - gmx:100818047 723.391