Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00047 ATGGAGGGGCCTCAGTTGAAGCATGTCCCGCCTACCGCCGCTCATCACCTGCTCTCTGATGCCCCCGAGGTTGCTCCTTCCGAGTTGAACGATACTGTCCAGAGTTTGCCTTCGAACGCCGTCAAGGACTTGTTGTCCCAAGAGATATGTGCTCGCTGCATCTTTCGGCTGTTTGGGGTCCAAGGGCACATCTATTCATGCTCCTTGCTTTCATCATCAACCATGAGTTATATTATTGGAGGACCAACTGATTTGAGCGGAGATACGATGGATAGTTGTTTTAGAAAATGTGAAAACTTAAGTAGTTCCAAGGATCCCAAATGTGATGCTAAACTTTGCAGCCTTTGTTTAGGGATCCTGCAGTTCAAATTTTCCTGTGACACAAGGACTCAATTGAACAAGAATACTCCTGATGCTGTGGCTGTCTTAATCGCTGACATGGTTAGGGAAGATGGTCATCAGATCGATAGCTTTTCCCTTGAAGTTTCAGTACCACCTGTTATTGTTGAAAACGATAATGCAATTCAGTCATACATGAGAACAAGATATGGAGCTGAGCCCTGGTTCCAAGAAAAGTTACATTTTGGGTGTGTGTCTACAAAGGACGCATTAAAGTTTTCAATAGTTTATCCTCTTGAAAATCTTCTTGGATGTAAATCAAATATGAACTCCTTCCGTATCCGTTTGACATGTGGTCTATCTAACTCATCAAAAGGGGCTAGAAAGTGTCCAGAAGGTGATAAGAGTTGCAAGAGAATAAAAACAGGTCTGGACAATGGAGTGGGTGTTACCTATGATTCCATGGTTTCTCACATTGAATGCTCAGATTCTTCCAAAGTTGAATCCAATCTAGATGGAGAAAAGCCTTTCAACAGTTTGCTTGAAATGTCCTCTAAGTTGTGTGGAATGTTTCTGGAAAAGGTGATTGGACCATGCCATTTTACAGTCTATTGCTGCAGGGCGCCTATCTATTTTGGTGGAAGATACCTGAAGTATTCACGGAATGTGAGTCAAACACGCTGGATCATTGATGATGAAAGAATGGGGGAAGCATCTGTCGAGGAAATAATTGGGGAAAACATCCTTCAAAGGTGCCATGGTGATAGCTATAAGTTTCATGCTGCTGGCAGAGAAGATATTGATGTCCGAATGTTGGGTCCAGGCAGGCCATTTCTTGTTGAGGTGCAAAATGTGCGACTTGTCCCATCTGATTCTTTTGTAAAGGATCTAGAGAAATTGATAAATAACTTGGAAAGTAAATTGGTTGGCGTGAAAAATCTGAAGTTGGTTGGTAGCCATGGTTGGAATGTTATGCGGGAAGGAGAGGCAGAGAAACAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAATGATGAAGATTTGCAATCTGTGTCTTCACTCAAGGATTTGAAAATTTTGCAGAGGACACCAATAAGAGTGTTACATCGCCGCAGTCCTTTAGAGCGTGAAAAGATTATTCACTGGATGAAAATAGAAACGGTTGCCGGAAGTTCCCAGTATTTTCTTTTGCATTTGTGCACACAGGCTGGGACCTACATCAAGGAATTTGTTCATGGAGATCTTGGACGCACCCATCCTAGTATCGGAACAATTTTGGGCTGTAGAGCTGAAATTTTGCAGCTTGATGTCACAAATGTCAAAATGGACTGTTTCCTTCCTTAG 1692 0.4255 MEGPQLKHVPPTAAHHLLSDAPEVAPSELNDTVQSLPSNAVKDLLSQEICARCIFRLFGVQGHIYSCSLLSSSTMSYIIGGPTDLSGDTMDSCFRKCENLSSSKDPKCDAKLCSLCLGILQFKFSCDTRTQLNKNTPDAVAVLIADMVREDGHQIDSFSLEVSVPPVIVENDNAIQSYMRTRYGAEPWFQEKLHFGCVSTKDALKFSIVYPLENLLGCKSNMNSFRIRLTCGLSNSSKGARKCPEGDKSCKRIKTGLDNGVGVTYDSMVSHIECSDSSKVESNLDGEKPFNSLLEMSSKLCGMFLEKVIGPCHFTVYCCRAPIYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGENILQRCHGDSYKFHAAGREDIDVRMLGPGRPFLVEVQNVRLVPSDSFVKDLEKLINNLESKLVGVKNLKLVGSHGWNVMREGEAEKQKQYAALVWISRPLNDEDLQSVSSLKDLKILQRTPIRVLHRRSPLEREKIIHWMKIETVAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGTILGCRAEILQLDVTNVKMDCFLP 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00047 563 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 315 557 - -
Accr3g00047 563 Gene3D - 322 446 - -
Accr3g00047 563 Gene3D - 447 557 - -
Accr3g00047 563 Coils Coil 407 427 - -
Accr3g00047 563 SUPERFAMILY Pseudouridine synthase 443 557 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr3g00047 563 FunFam tRNA pseudouridine synthase Pus10 322 446 - -
Accr3g00047 563 PANTHER UNCHARACTERIZED 29 560 IPR039894 -
Accr3g00047 563 FunFam tRNA pseudouridine synthase Pus10 447 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00047 Accr-Chr3 652069 664332 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00047 K07583 - gmx:100780683 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00047 3 652069 664332 Accr3g00047 3 652069 664332 ECH