Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00036 ATGGGCTGTTGTGCATCTTCCTTTTCCAAGGATTCTGTTCCCCAAAACATCCCTCATTTGGATAATCACAAGAACAACATCCTCAATCTTCCTTCTTCCTCCAACGGCGCTGATTATACTGCTGCTGCTGCCGACTTCCCGCCGTTCTTGGAGTTCTCCCTTGCCGACCTCAAAGCTGCCACCAACAACTTCAGCCCCGATCACATCGTCTCCGAGAGCGGCGAGAAAGCCCCCAATGTCGTCTACAAAGGCCGCCTCCACAATCAAAACCGCCGTTCTATTGCTGTCAAGAGATTCACTAAATTGGCATGGCCCGACCCTAAACAGTTCGCGGATGAAGCTTTGGGTGTCGGAAAATTAAGACACAAGAGGCTTGCCAATTTGATTGGTTATTGTTGTGATGGGGATGAGAGACTACTCGTTGCAGAGTACATGCCCAACGATACCCTTGCCAAACATCTATTTCACTGGGAGAATCAGACAATTGAGTGGGCCATGCGGTTAAGAGTTGCCTTAAACATTGCTGAAGCATTAGATTATTGTCATAGAGAAGGCCATCCATTGTATCATGACTTGAATGCTTACAGAGTTCTCTTTGACGAGAATGGTGATCCCCGGCTTTCATGTTTTGGTTTGATGAAGAATAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACCCCGGAAAGTGTCATCTTCAGCTTTGGAACTGTGTTATTGGATCTTCTAAGTGGAAAGCATATCCCTCCAGGTCATGCTCTTGATATGATAAGGGGCAAGAATATACTTATCCTTATGGATTCACATTTGGAGGGAAACTTTTTAACTGATGAAGCAACTGTGGTTTTAGATCTAGCTTCTCACTGTTTGCAGTATGAACCTCGGGAGCGGCCCAAGACCAAGGACCTTGTTATCACACTCTCCCCGTTACAAAATAAACCTGATGTTCCATCAAATGTGATGCTTGGAATTCCCAAGCAAGAGGAAGCTCCTCCTACTCTGCAGCATCCTCTTTCTCCAATGGGTGATGCTTGTTCTCGAATGGACCTTACAGCTATCCATCAAATTCTGTTAATGGCGCACTACAGAGATGATGAAGGGACTAATGAGTTATCTTTCCAAGAGTGGACCCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCTTTCCGTGACAAGGATTTTAAGACTGCGATGGAGTGTTACTCCCAGTTCATCGAGGTGGGAACAATGGTATCCCCAACAGTGTATGCTCGGAGGAGCCTTTGCCATCTGATGTGTGATCAACCAGACGCTGCTCTAAGAGATGCAATGCAAGCGCAGTGTGTGTATCCTGAGTGGTCTACGGCATTTTACATGCAGGCCGTTGCTCTTTCCAAGTTAAACATGGACAAGGATGCTGCTGACATGCTCAATGAGGCTTCTGCCCTTGAAGAAAAAAGACGGGGCAAAGGCTCTTCCTCTTGA 1518 0.4644 MGCCASSFSKDSVPQNIPHLDNHKNNILNLPSSSNGADYTAAAADFPPFLEFSLADLKAATNNFSPDHIVSESGEKAPNVVYKGRLHNQNRRSIAVKRFTKLAWPDPKQFADEALGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALNIAEALDYCHREGHPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPGHALDMIRGKNILILMDSHLEGNFLTDEATVVLDLASHCLQYEPRERPKTKDLVITLSPLQNKPDVPSNVMLGIPKQEEAPPTLQHPLSPMGDACSRMDLTAIHQILLMAHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAMECYSQFIEVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPEWSTAFYMQAVALSKLNMDKDAADMLNEASALEEKRRGKGSSS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00036 505 Gene3D Tetratricopeptide repeat domain 394 501 IPR011990 GO:0005515
Accr3g00036 505 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g00036 505 SUPERFAMILY Protein kinase-like (PK-like) 47 328 IPR011009 -
Accr3g00036 505 Gene3D Transferase(Phosphotransferase) domain 1 146 337 - -
Accr3g00036 505 Coils Coil 477 497 - -
Accr3g00036 505 Gene3D Phosphorylase Kinase; domain 1 40 144 - -
Accr3g00036 505 FunFam probable serine/threonine-protein kinase At4g35230 40 144 - -
Accr3g00036 505 ProSiteProfiles Protein kinase domain profile. 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00036 505 FunFam probable serine/threonine-protein kinase At4g35230 394 503 - -
Accr3g00036 505 FunFam probable serine/threonine-protein kinase At5g41260 146 337 - -
Accr3g00036 505 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 37 499 IPR045845 GO:0004672|GO:0009742
Accr3g00036 505 SUPERFAMILY TPR-like 399 495 IPR011990 GO:0005515
Accr3g00036 505 Pfam Protein kinase domain 80 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00036 Accr-Chr3 477496 481764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00036 52 328 Glycoside Hydrolase AT3G07070 35.526 4.87e-43 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Accr3g00036 Pkinase 6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00036 K14500 - cave:132190020 864.374