Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00024 ATGAGCTGCTTCTCTTGCATTAGTCGTGGTCGCTCAGATGCAAGAAGAATCCAAATTGATAATGCTCCTCGATCTACCTCTTCTTCGGGGACTGGGCGGTCCAAGTCCCATGCCCGCGACCATGGAAGCAAGGGAGGATTTTCAGATGGGAAGGGGAAGAATGGCGTCGCTGGCAGCCCAAAAGACGGTGCAGCACGTAGCTTCACTTTTCGTGAACTTGCAGCTGCAACGAGGGGTTTCAAGCCCGTGAATTTGATCGGGGAAGGAGGTTTTGGAAGGGTTTACAAAGGTCGTCTTGATACAGGCCAGCTTGTTGCCGTCAAACAATTAAATCACGATGGTTATCAAGGTTTTCAGGAATTCATAGTAGAGGTTCTCATGTTAAGCCTACTACACCATTCTAATCTTGTCACCTTGTTTGGTTACTGCACCGACGGAGATCAGAGGCTTTTGGTTTATGAATATATGCCTATGGGTAGCGTGGAAGATCATCTTTTTGATCTAAAACCAAACCAAGAGCTGCTAAGTTGGAACGATCGGATGAAGATTGCTGTTGGAGCTGCACAAGGGCTTGAGTACCTTCATTGTAAAGCAAATCCACCTGTTATCTATCGGGACTTGAAATCTGCAAACATATTATTAGACAATGACTTCAAACCAAAACTCTCAGATTTTGGGCTTGCTAAGCTTGGTCCTGTTGGAGACAATACACATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCCCCAGAGTATGCCATGAGTGGCAAATTGACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTTTTGATGGAGTTGATTACTGGACGAAGGGCAATAGACGTCAGTAAGAAACCAGGGGAGCAAAACTTAGTTGCATGGTCTCGACAGTTTCTAAAGGACCGGAGGAAGTTTGTACATTTGGTTGATCCTCGTCTTGAAGGACAGTTCCCCTTGCGCTGTTTGCATCATGCTATTGCTATCACTGCAATGTGTCTCCAAGAGCAACCAAATTTCCGCCCACTTATTGGTGATATTGTTGTTGCACTGGAATACTTGCACTCGCAGAGTAAAACCTCAGAGGTCCATAAAGGTGGGGAGCAATGTCTGCCACCTCGATCACCAATTCTAGATTGA 1146 0.4555 MSCFSCISRGRSDARRIQIDNAPRSTSSSGTGRSKSHARDHGSKGGFSDGKGKNGVAGSPKDGAARSFTFRELAAATRGFKPVNLIGEGGFGRVYKGRLDTGQLVAVKQLNHDGYQGFQEFIVEVLMLSLLHHSNLVTLFGYCTDGDQRLLVYEYMPMGSVEDHLFDLKPNQELLSWNDRMKIAVGAAQGLEYLHCKANPPVIYRDLKSANILLDNDFKPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLMELITGRRAIDVSKKPGEQNLVAWSRQFLKDRRKFVHLVDPRLEGQFPLRCLHHAIAITAMCLQEQPNFRPLIGDIVVALEYLHSQSKTSEVHKGGEQCLPPRSPILD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00024 381 FunFam probable serine/threonine-protein kinase RLCKVII 53 155 - -
Accr3g00024 381 ProSiteProfiles Protein kinase domain profile. 80 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00024 381 Gene3D Transferase(Phosphotransferase) domain 1 156 372 - -
Accr3g00024 381 CDD STKc_IRAK 86 354 - -
Accr3g00024 381 Gene3D Phosphorylase Kinase; domain 1 56 155 - -
Accr3g00024 381 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Accr3g00024 381 SMART serkin_6 80 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00024 381 SUPERFAMILY Protein kinase-like (PK-like) 64 355 IPR011009 -
Accr3g00024 381 MobiDBLite consensus disorder prediction 19 33 - -
Accr3g00024 381 PANTHER OS07G0668900 PROTEIN 35 363 - -
Accr3g00024 381 FunFam Serine/threonine-protein kinase PBS1 156 371 - -
Accr3g00024 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Accr3g00024 381 MobiDBLite consensus disorder prediction 15 63 - -
Accr3g00024 381 Pfam Protein kinase domain 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00024 Accr-Chr3 332038 335003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00024 1 356 Glycoside Hydrolase AT3G07070 58.824 5.72e-148 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr3g00024 Pkinase 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00024 - - mnt:21407579 587.03