Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00021 ATGAGTGCCAAGAACCCTAAAAACGTGTATCACATCGGAGGCCTCCAAGTGGAATTTCCTTACCAGCCATACGGTTCTCAGTTTGCATTTATGGGTAGAGTCGTCTCTACCCTTAACCGGGCTCAGAGAGAAGGCCATTGTCACGCATTGCTTGAGTCTCCAACCGGTACTGGCAAGTCCCTTTCGCTTCTCTGCTCCTCCCTCGCTTGGCAGCAGAACTACAAGTTAAATAAACAGCACAAAAATCTCTCTTACCTGAAGCCCGCTCCAGAAGCAACGACTGACCCTCTTGTTTACGGTGGTGGATTTGTTCCCGATGAGGTTTCTCCGACATCAGAAAATATGGAGCTGCCAGAGACAGAGGCTAACAACAAGATGCAGAAGAAAAAGGCTGCCCCAACCATATATTATGCTTCGAGGACACACTCACAAATTTCTCAAGTAATTCGTGAACTGCGGAAAACATCTTATCGAGTGCCTATGGCTGTGCTGGCGTCACGGAAACATTACTGTACCAATAAACATATACTGGCCAAAGACAATATTGATGAAGAATGTAAACTACTTTTGACAGATCAGGAAACAGGATGCCCAGAATTCAAAAATGCACATAAAGTCAAAAGTCACCCATCCCTACAAAGAGGAGGATGTAACGAGGTACATGATATAGAAGATCTTGTGAAAGTTGGACAAGCAGTGAAAGGTTGCTCCTATTATGCAGCTCGCTCTATGTCAGATGATGCCCAATTGGTTTTTTGTCCTTATAGTTATATTATCAATCCGGTCATTCGGGGAGCAATGGATGTAGATATAAAAGGAGCCATTGTGATTCTGGATGAAGCCCACAATATAGAGGATATCACTCGTGATGCTGGTAGTGTCGATATTGAAGAGGATGTTTTGGATAAGCTACAAACGGAGCTTCAACAACTCTGTCCTGTCAATCCTCTGATATACCAACCTTTGTATGAAATGGTGCAGGGTCTTACAAGCTGGATAGAACGTAGGAAAAATAAACTAGAAAAGCGTGATTTTCAGCACTATGTATCTTGTTGGACTGGGTCAAATGCTTTATCAGAACTCCAAGAAGCAAATATTTCACTTCAGTGCTTCCCTATCCTGCTAGAATGTGCTACCAAGGCAATCAAATTTGCTTCAGATTCGGAGTCAGATCTACCCCATTTAAGTGGCATGTCAGTGATAACACTGGAAGGCTTATTCTCTTCACTAACTTATTTCTTCTCAAGAAATGGTTCTCATATGCTGGATTTCCAGCTTGCTCTGCAGCGAAGTGTTAAGAAAGAAGCTGGAAGATCTTTTGGAAATTGGACCCACACTTTGAGTTTATGGTGCTTGAATCCAGCAGTTGTGTTTAGTGACATTGCCAATCTTTGTTTATCAGTCATTTTGACTTCTGGGACATTGTCACCAATGAATTCCTTTTCATCTGAGCTAGGAGTTCAGTTTGAAACTAGTCTGGAAGCTCCGCATGTAATTAATGTTGACTCTCAGGTGTGGCCTGCTATAATTTGTACCGGTCCAGGTAATTATCCTTTGAATGCAAGTTATAAAACAGCAGATGGATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATTTTCAAAATTGTTCCTGGTGGCTGTCTTGTTTTCTTTCCAAGTTATAAATTAATGGAGAAATTATGCAATCGATGGTCCGAAACAGGTCAATGGTCTCGTCTAAATGCGGAAAAATCACTTTTTGTCGAACCTAGAGGAGGAAGCCAAGATGATTTTGAACTTGCTTTAAAAGGGTATTATGACTCAATTCATCTTCACACTACACCAACATTGGGCAGGAAAAGAAGGGTTAAGAATGTTGGCTTTAGTCATTTACATGCAGTCAATTCTCCAAAAAATTCTAAGAAACGAGGAGCTGCTTTACTTGGCGTTTGTCGAGGAAAGGTCTCTGAGGGCATTGATTTTTCTGATGATTATGCTCGAGTAGTTATAATAGTCGGCATTCCATTTCCCAACATAAATGATATTCAAGTTGCACTAAAGAAGAAATACAACGACACATACAAATCATCCAAGAATCTTTTGAGTGGAAATGAGTGGTATTGCCATCAAGCATTTCGAGCTTTGAATCAAGCAGCAGGTCGTTGCATACGGCATAGGCTTGATTATGGAGCAGTCATCTTATTGGATGAACGCTTTAAGGAAGAGAGAAATAGAGCATTCATTTCAAAGTGGTTAAGAAAAACCTTAAGGATATACGACAGCTTTGACTTGTCTTTGAAGGGACTAAGATCGTTCTTTGAGAAGGCCAAGGAGCAGTTTGGCACAAATGTCACTCAAAATTTGGGTTTAAACCAGGAAAGTGACCAAGCCAAGGATCAGAATATGGGATTTATAAGAAAGACAAATAAGAAACTGTCTGAGTCTGGTAATGGTGGCGATAGAAAAGTAGAAATGATCAAGGATGAGAATCAGCCATCTGTGCAAAAGGATAGTGACTCATACAACTGTCAAGACTGTTTTGACCCAAGGGACTGCAAACAGGCAGTATCACGCTTCACTGGGGTATCATCTGCGGCAGTTATACATGAAGAAGTCTCCCTTGTGAAGAAGTCTCCGTTGGATGGCAGCACTGTCCCTGCTAGCCCTGGTTATGGCTGTAAGGATGACGACTCTAGCTCTACCTTGATTGAGGCACCTTCTGAATTAAATGATCAGTCAGTCCTTCCAATTTCTTCAAGTATCGGAAGTAAAGCTTCTTCAACATCTCAGTGTTTAATGTCAGTTACTCCTGAAAAAACTGTAACTTCAAAAAGCTGTCATACTGTGGAAACAGAATCATCTTTGGATAGGAGCGTTAATTCTCACACCCATAAAAGGAGAAAGTCCATGGACATACCATTTATAAACCTTATAGGGGAAGAGAATTACATCACCCACTGTGCCAGCATCCCTTCAAGGCACACTGTAAGCTTGGTGAATGTCAACGAGGCAACAAATGGAAATAAATCTGAATTTTACAGAAAATTGAAGTCAAATTCACTTCGATCACAGACAAGCAATCTGTGTAGTTCATTTTTATTGACTGATCCTGTCATGGAGAAAAGGTTGCAAATATTTTGCTCACTTTGCAAAAACCCATTGGGCCGGCCTGAGAATAATCTATATATGACATGTTCTATGACTTCATCATCAAAAGTTCACCTAAGATCTCTTTTGAAACAGAGACTGAAAGCTTACAATGATGATGATTTAAGAAGTGTACCAATTATTATAACTTGCATTTCATATGTTGATCAACGTATCTGCGACATAGTTGATGGAAGTGTTCCAGAACAAGGTATTTGGTGCCCAGAAGATGGATGTGTTTTCAGGTCTCTGTTTTGCTGCTTTTGCAGTAAATCGAACAATTTGCTTGGGGTACAGATCATGGCAACTGATGCATCAAATAGTCATTTACTCGACAAGATTTTGTTTTACTTTGACTGTTTGGAAGTTAAGAATCTTGAGGAATCAAGGAGTGAGGCTTCAATGAAAGCGGATTTGCTGCCAAATAGAGACTCGGGCGTGGATGAAATTGCTGTCTTGAATTCTTTTGACAAATTTGATCTTCCACAACTTGAGAAGTCAAGAATCTTGAAGACTAGAAAATCGAAGCAGAAATTGCCAATACGAAGCTTCCAATGCTGA 3696 0.4056 MSAKNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVVSTLNRAQREGHCHALLESPTGTGKSLSLLCSSLAWQQNYKLNKQHKNLSYLKPAPEATTDPLVYGGGFVPDEVSPTSENMELPETEANNKMQKKKAAPTIYYASRTHSQISQVIRELRKTSYRVPMAVLASRKHYCTNKHILAKDNIDEECKLLLTDQETGCPEFKNAHKVKSHPSLQRGGCNEVHDIEDLVKVGQAVKGCSYYAARSMSDDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIEDITRDAGSVDIEEDVLDKLQTELQQLCPVNPLIYQPLYEMVQGLTSWIERRKNKLEKRDFQHYVSCWTGSNALSELQEANISLQCFPILLECATKAIKFASDSESDLPHLSGMSVITLEGLFSSLTYFFSRNGSHMLDFQLALQRSVKKEAGRSFGNWTHTLSLWCLNPAVVFSDIANLCLSVILTSGTLSPMNSFSSELGVQFETSLEAPHVINVDSQVWPAIICTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLNAEKSLFVEPRGGSQDDFELALKGYYDSIHLHTTPTLGRKRRVKNVGFSHLHAVNSPKNSKKRGAALLGVCRGKVSEGIDFSDDYARVVIIVGIPFPNINDIQVALKKKYNDTYKSSKNLLSGNEWYCHQAFRALNQAAGRCIRHRLDYGAVILLDERFKEERNRAFISKWLRKTLRIYDSFDLSLKGLRSFFEKAKEQFGTNVTQNLGLNQESDQAKDQNMGFIRKTNKKLSESGNGGDRKVEMIKDENQPSVQKDSDSYNCQDCFDPRDCKQAVSRFTGVSSAAVIHEEVSLVKKSPLDGSTVPASPGYGCKDDDSSSTLIEAPSELNDQSVLPISSSIGSKASSTSQCLMSVTPEKTVTSKSCHTVETESSLDRSVNSHTHKRRKSMDIPFINLIGEENYITHCASIPSRHTVSLVNVNEATNGNKSEFYRKLKSNSLRSQTSNLCSSFLLTDPVMEKRLQIFCSLCKNPLGRPENNLYMTCSMTSSSKVHLRSLLKQRLKAYNDDDLRSVPIIITCISYVDQRICDIVDGSVPEQGIWCPEDGCVFRSLFCCFCSKSNNLLGVQIMATDASNSHLLDKILFYFDCLEVKNLEESRSEASMKADLLPNRDSGVDEIAVLNSFDKFDLPQLEKSRILKTRKSKQKLPIRSFQC 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00021 1231 MobiDBLite consensus disorder prediction 809 830 - -
Accr3g00021 1231 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 771 IPR045028 -
Accr3g00021 1231 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 274 283 IPR002464 -
Accr3g00021 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 731 IPR027417 -
Accr3g00021 1231 SMART deadxpd 15 343 IPR006554 GO:0003678|GO:0016818
Accr3g00021 1231 FunFam Fanconi anemia group J protein-like isoform E 123 333 - -
Accr3g00021 1231 MobiDBLite consensus disorder prediction 804 836 - -
Accr3g00021 1231 SMART Cxpdneu3 557 737 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Accr3g00021 1231 Pfam DEAD_2 137 300 IPR010614 GO:0003677|GO:0003678|GO:0005524
Accr3g00021 1231 CDD SF2_C_XPD 503 735 - -
Accr3g00021 1231 Pfam Helicase C-terminal domain 539 750 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Accr3g00021 1231 Gene3D - 516 761 IPR027417 -
Accr3g00021 1231 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 13 352 IPR014013 GO:0005524
Accr3g00021 1231 FunFam Fanconi anemia group J protein homolog 516 763 - -
Accr3g00021 1231 Gene3D - 23 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00021 Accr-Chr3 251855 266186 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00021 K15362 - gmx:100779610 1724.91