Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00002 ATGGTTTCGCTTCGTTCCGCAGTTTCTCCTCCTCCCTCTGTTTCCTCTTCTACTTCTTGTTTCCTCGGCAGCTTCTTCTCTTTCTGCTGTGCCCCTAAATCTAGAAACAACTTGATAATCAATCAGAAACGCCGTACTGTCTTCAAAGCCTCGTGGCAAGAGCTTGCCGGAGTGTTGCTGTTCTCGGCGATTCCTTTTAGTGCTGTAAAAGTTTTAGCTAATAGTCCACTAGGGAGCTCGCTTCAGAGGAGAATGCAAGAGAGAAAGAAAATTGCTCTGGATGACTCGTCCATATACAAGACTTTAGCCCAGAAGGCCAGAGAAGAGAGCATTTGGTATGGAGATGGTCGGCCCCATTGGCTGGGTCCTATTCCATATGATTATCCAGAATATCTTGCTGGGGAACTTCCTGGGGATTACGGATTTGACATTGCAGGGCTGGGCAAGGATCCTGTAGCTTTGCAGAAAAACTTCAACTTCGAGATATTGCATGCTCGTTGGGCTATGCTTGCATCTGTTGGTGCTCTGATTCCTGAAATACTAGACCTATTTGGGGCCTTTCATTTTGTTGAACCCATCTGGTGGCGTGTTGGCTATTCAAAGCTCAAGGGAGATACTTTAGACTACCTTGGAATCCCGGGACTTCACTTAGCTGGAAGCCAAGGAGTGGTCGTAATTGCTATTTGCCAGGCGCTCCTCATGGTTGGACCAGAATATGCTAGATATTGTGGGATTGAAGCATTGGAACCTCTAGGAATTTATCTGCCGGGCGACATAAATTATCCTGGAGGAGGACTGTTTGATCCCCTGAATCTGTCCAAAGATCCTAAAGCTTTCGAGGAGCTGAAGGTTAAAGAAATTAAAAATGGACGCTTGGCAATGATTGTGTGGTTAGGATTTTACGCTCAGGCAGCTCTGACGGGCAAAGGTCCTGTGCAGAACCTTCTTGATCACATCTCTGATCCTTTCCACAATAATATTTTGTCCACGCTCAACTTAGTGAATGTAGCTACATGA 1017 0.4592 MVSLRSAVSPPPSVSSSTSCFLGSFFSFCCAPKSRNNLIINQKRRTVFKASWQELAGVLLFSAIPFSAVKVLANSPLGSSLQRRMQERKKIALDDSSIYKTLAQKAREESIWYGDGRPHWLGPIPYDYPEYLAGELPGDYGFDIAGLGKDPVALQKNFNFEILHARWAMLASVGALIPEILDLFGAFHFVEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGGLFDPLNLSKDPKAFEELKVKEIKNGRLAMIVWLGFYAQAALTGKGPVQNLLDHISDPFHNNILSTLNLVNVAT 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00002 338 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Accr3g00002 338 FunFam Chlorophyll a-b binding protein, chloroplastic 119 331 - -
Accr3g00002 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 94 331 IPR001344 GO:0009765|GO:0016020
Accr3g00002 338 SUPERFAMILY Chlorophyll a-b binding protein 111 331 - -
Accr3g00002 338 Pfam Chlorophyll A-B binding protein 129 304 IPR022796 -
Accr3g00002 338 Gene3D Chlorophyll a/b binding protein domain 119 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00002 Accr-Chr3 47149 49939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00002 33 332 Chloroplast and Mitochondria Gene Families AT1G76570 74.667 8.75e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00002 K14172 - mof:131162977 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00002 3 47149 49939 Accr3g00002 3 47149 49939 ECH