Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03681 ATGGCAAAGACAGGCGTCTCTGAAAACGACTCAACTACGCTTCCCCATGCAAAGGCTTTGGATTTGAAGCACAAATTGCGGGGGTGCGTCAATATTATCCTGGACGCCGATGATTTCCCGCTGGCCAGACTTGACGAAGCTATTACAACTCTTTCTGCCCTCAAGGATTTGAAATGTAAATCTACCGGCTCCTTCCCTCAGGAATTCCATGATTTGTCTATTCCGCCGGAATTTCGATGTCCCATTTCTCTAGAGCTAATGAGTGATCCTGTTATCCTGTCCACCGGACTGACTTATGATCGGTCATCTATCCAAAGATGGTTAAATGAAGGCCACAGGACATGCCCGCAAACGCAGCAAGTCCTTTCTCTCTCCATCCTTACTCCAAATCATCTGGTCCATGACATGATTTCTCATTGGTGCAAAGAGAACGGAGTTGAGTTGCCTAAGCCTCTTGGGGACATTGATGAAGAAGTAATAACTGATGCAGACAGAAGCCATTTAAATTCATTGCTCAAGAAGTTGTCGATGTCTATTTCTGATCAGAAATCAGCTGCGAAAGAGCTCCGGCTATTAACAAAGCGAATGCCCTCATTTCGAATCCTTTTTAACGAGTCCAGTGATGTGATATTACAGTTGCTCAGTCCATTGTCACCTGGTACGGCTTATATCCCTCCTGACCTTCACGAGGACTTGATCACTACTGTTCTAAATTTATCAATTCATGATGATAATAAGAAAATGTTTGCTGAGAATCCTATGGTCATCCCTCTGCTGATTGAGTCCTTAAAATTTGGAACCATCCAAACAAGAAGTAACGCTGCGGCAGCTATTTTCTCATTATCAGCACTTGATTCCAACAAGAGCACCATTGGAAATTCTGGGGCCATGAAACATTTAATTGAGCTTTTGGAGGAGGGACATCCATTGGCCATGAAAGATTCTGCCTCTGCGATATTCAACCTATGTTTGGTGCATGAAAATAAAGGAAGGACTGTTCGAGAAGGAGCTGTCCCAGTTATCTTGAACAAGATCATGGACCGTGTTTTAGTTGATGAGTTGTTGGTTATTATGGCACTCCTATCTAGCCATCCAAAGGCGGTTGAAGAAATGAGCGACCTTGGTGCAGTCCCCTTGTTGCTCAGTATAATACGGGAGAGCACATCCGAAAGCTGCAAGGAAAATTGTGTTGCAATCCTATATACAATCTGTCTTACTGATAGAACAAAATGGAAGGAAATGAGACAAGAAGAAAAAAGCAAGGGCACACTTTCCGAACTCGCACTATGTGGGACTTCAAGGGCCAAGAGAAAGGCTAATGGGATTCTTCAGAGGCTCAATAGATCTCCCACCTTGACACACACGGCTTAG 1371 0.4391 MAKTGVSENDSTTLPHAKALDLKHKLRGCVNIILDADDFPLARLDEAITTLSALKDLKCKSTGSFPQEFHDLSIPPEFRCPISLELMSDPVILSTGLTYDRSSIQRWLNEGHRTCPQTQQVLSLSILTPNHLVHDMISHWCKENGVELPKPLGDIDEEVITDADRSHLNSLLKKLSMSISDQKSAAKELRLLTKRMPSFRILFNESSDVILQLLSPLSPGTAYIPPDLHEDLITTVLNLSIHDDNKKMFAENPMVIPLLIESLKFGTIQTRSNAAAAIFSLSALDSNKSTIGNSGAMKHLIELLEEGHPLAMKDSASAIFNLCLVHENKGRTVREGAVPVILNKIMDRVLVDELLVIMALLSSHPKAVEEMSDLGAVPLLLSIIRESTSESCKENCVAILYTICLTDRTKWKEMRQEEKSKGTLSELALCGTSRAKRKANGILQRLNRSPTLTHTA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03681 456 FunFam RING-type E3 ubiquitin transferase 351 452 - -
Accr2g03681 456 SMART Ubox_2 77 140 IPR003613 GO:0004842|GO:0016567
Accr2g03681 456 Gene3D - 166 451 IPR011989 -
Accr2g03681 456 SUPERFAMILY RING/U-box 68 151 - -
Accr2g03681 456 CDD RING-Ubox_PUB 75 127 IPR045210 -
Accr2g03681 456 ProSiteProfiles U-box domain profile. 73 147 IPR003613 GO:0004842|GO:0016567
Accr2g03681 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 147 IPR013083 -
Accr2g03681 456 FunFam RING-type E3 ubiquitin transferase 73 147 - -
Accr2g03681 456 PANTHER U BOX DOMAIN-CONTAINING 42 446 - -
Accr2g03681 456 SMART arm_5 284 324 IPR000225 GO:0005515
Accr2g03681 456 SMART arm_5 364 405 IPR000225 GO:0005515
Accr2g03681 456 SMART arm_5 242 283 IPR000225 GO:0005515
Accr2g03681 456 SUPERFAMILY ARM repeat 169 446 IPR016024 -
Accr2g03681 456 Pfam U-box domain 74 144 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03681 Accr-Chr2 72212231 72214456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03681 136 456 U-box Gene Family AT3G07360 57.927 3.55e-121 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03681 - - gmx:100806619 619.387