Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03661 ATGGGGACAGAACTCATGAGAACTTGTGTTCAAGAAGATAACGATGAGTTTCCATCAGTTCCACCTGGCTTTGAGTCATATACATCTTCCTCACTGAATACAGGGGAAGGCAGTCAGAAACAGAATGATAAAACCAAGATTAGTTTTTCAGTCTCTACAAGTGTTTCTTATTGTAAATCACAGTCAATTCAGGCTAGAACTGATGTTCAAGCTAGTGATACTGCAAAGGTTCATAGGTCCTTTCGACGAAGACGATGGATCAACCATGGACAGTATGATTACAGTTCAGAGGAAGACTCTGATTCCGAGCGGTTTGATCAAAATTTTTCCTCAGTACCTAGTCTTCCAAAGGGAATTATCCGTGGATGTCCGGATTGCAGTAATTGCCAAAAGGTTATTGCCAGATGGAGACCAGAAGATGCTTGCAGGCCCACCCTTGAGGACGCTCCCATTTTTTACCCAACTGAAGAGGAGTTTCAAGACACCATGAAATATATAGCAAGTATTTGTTCCAGAGTAGAACCATATGGCATTTGTCGCATTGTTCCCCCTTCGTCATGGAAGCCCCCTTGTCCTCTTAAGGGAAAGGCTATATGGGAGGGTTCTAAATTTGCTACTCGAGTTCAAAGGGTTGATAAGCTTCAGAATCGTGATTCAATGAGAAAGATGTCAAGGATTCATCTTAATACGAGAAGGAAAAGGAAAAGATGCCATAGAATGGGATTAGATAATGACAGTAATAGAGGACCTAATACAGGATTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCTGGCCCAGAATTTACTTTGGAAACATTTCAGAGATATGCAGATGAATTTAAAGCCAGATACTTCAGAAAGAATGATAATATATCTAATATGGGAGGTAATACAACAATGTCAAAAGGATGGGAGCCTTCTGTGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGACCTGGAAACGGGGGTTTTTGGGAGTGGCTTTCCCAGAAAGCGTAGTGAAGTTGGTTCTGATTTACACACAGAGTACATAAAGTCTGGCTGGAATTTAAATAACTTTGCTAGGCTTCCTGGATCTCTGCTTTCATACGAAAGCAGCGATATATCTGGTGTCCTTGTGCCCTGGCTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGACCACCATTTATATTCATTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAAGATGCTTGCAAACTGGAAGAGGCCATGAGAAAGATTTTGCCGGGCCTTTTTAAAGAACAACCTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATCCTCAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTCCAGAATCCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGATTCAATTGTGGCTTCAACTGTGCAGAGGCTGTTAATGTAGCTCCAGTTGACTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGGTCAAGGACGTAAGACTTCTATATCTCATGATAAATTGTTGCTTGGGGCTGCTAGGGAAGCAGTGCGAGCACTGTGGGAGCTTAACCTGCAGAAGAAGAATACTTCAGCTAATCTAGGATGGAAAGATGTCTGTGGAAAAGAGGGTGTTCTAGCAAAAGCACTCAAGACACGCGTTGAGATGGAACAAGTAAGGAGGAAATTTCTCTGCAGTTCTTCACAGGCATTGAAAATGGAGAGCAGTTTTGATGCCACGAGTGAAAGGGAATGCAGTGTTTGCTATTTTGATTTACACTTATCTGCAGCTGGTTGCCATTGTTGCCCAGACCGATATGCTTGCTTGGATCATGCAAAGCAGTTCTGTTCATGTGCTTTGGATTCCAGATTCTTCCTCTTCCGTTATGATATTAGTGAATTATTTATCCTCGTCGAGGCATTGGAAGGGAAATTAAGTTCAATATACAGATGGGCAAAATTAGATCTTGGGTTGGCACTAACTTCTTCTATATCAAAAGACAAAAGCCGATGTAGCAACTCAATTAAATCTTCAAAGGAAACAATGCTTCCCAAATTGAGATTAGATTCCTCAGATCTGTCCAGTTCTTCTTGCGGCACTATGCTTAAAGAGACGACATTGCATCCATCAGTTGTCTCTATTGAAGATTCTCATTTGATAGATGTCCCAATTGAGAATCTGAGTTTTATAAAACTAAGAAAATCAGCAGAAGATGTGATTCCCTTGGGTTATTCAAAAGAACCGTCTACATCTAATTTCTGGACAACACCAAGTGAGATGACTAGTCATGAGAGAGATTCTGAGAAAGAGTCAGTTATTTGCAAATCTGCTGTCGAGAATCCTGTTTGTCAGTTGCCTGTAGGGGGTACCTCCTCTCCTTTATCTCTTCCTTTAGCTGAACATGGACCTAAGAAAACTCCTTATGGGCATGATAATGTTATACTTCTTAGTGATGATGAAACTGATGAACCTAAGATCACAGAAACAGATAGCAAGAAGAAGCTGTCTCAAAGGCTTATAGGTTACTTTGATAAACTAAGCCCATGTAATTATAGAGAAGATCCAGACGGGACTGTCCCTGTCACAGATGCTGCTTTAAAGGTTGGGAATGAGGTGCCTCATGAAAATATGAGTTCTCATTCAACTTATCATTTGCATGTGAAGCAGGAACATGATATAATTAAGGGAGCAGTTTTAGATTCTACTCCAGTTGATTTATCCTGCAATATTGGTTTTGGTAGTGCTGAGTCGGTCAGGCAAATTCAGGCTTCCTCAACAAGAGAGAGTAGAGATCATTATCTGGATTCTTCAGAGAGTTGTCCTCTGAATCCACAGCATTCTGGGACTGTCCAGCCTAAGAATGAGGACAACCATGAGAAGATTGGAGTATTTAGTCCAGATAATGTGAGAGCTGTTAACGGAATCCTGTCCTGTAGTCCAAACAATTTGGGAAGATACTATCGTCAGAAAGGTCCTCGTATAGCAAAGGTCGTCCGGCGCATCAACTGCAATGTTGAGCCTCTAGAATTTGGAATCGTGTTTGCTGGAAAGTCCTGGTGCAACAGTCGGACTATATTTCCAAAGGGATTTCGAAGCCGTGTAAGATACATAAATGTCTTAGACCCAACAAGTATGTGTTATTATATTTCAGAAATTCTTGATGCTGGACGAGATGGGCCTCTGTTTATGGTGTCCTTGGAACATCACCCAAGTGAGGTGTTCATTCATCTTTCTGCCGGTAGATGCTGGGAACTGGTACGAGAGAGAGTGAATCTGGAAATCACTAAGCAACATAAGCTGGGAAGAAAGGACCTTCCTCCTTTGCAGCCACCTGGCAGCATTGATGGCTTTGAAATGTTTGGGTTTTCTTCGCCAGCTATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGTGTCAGTAAGGAATATTGGGATTCGCGGCCCTATTCACGGGCTCTCGGTCAAATTCAGCAAACTTCACGGCCCAAAGAAAATGGTGCAAGTGCGGATGGGCCATTCCTGGGGGGAAACGTTCAAGGGGTCCATAGGAATGAGGTCGTGCCTATTGGAATAGATGCAGTGTTGAGGAGCCTGTTCAAAAAAGCTAACGAACAAGAATTGAACTCGTTGTGCAGCATTCTTTGTGACGACAACTGCAATACTGCAGCTGACGGCAGCCTTGTTGTTCAACTTCTCAACGAAGAGATCAGCAGTCGTCCCAGATGA 3813 0.427 MGTELMRTCVQEDNDEFPSVPPGFESYTSSSLNTGEGSQKQNDKTKISFSVSTSVSYCKSQSIQARTDVQASDTAKVHRSFRRRRWINHGQYDYSSEEDSDSERFDQNFSSVPSLPKGIIRGCPDCSNCQKVIARWRPEDACRPTLEDAPIFYPTEEEFQDTMKYIASICSRVEPYGICRIVPPSSWKPPCPLKGKAIWEGSKFATRVQRVDKLQNRDSMRKMSRIHLNTRRKRKRCHRMGLDNDSNRGPNTGFCEIERPFGFEPGPEFTLETFQRYADEFKARYFRKNDNISNMGGNTTMSKGWEPSVENIEGEYWRMVERPTEEIEVLYGADLETGVFGSGFPRKRSEVGSDLHTEYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKILPGLFKEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQIAIELYRGQGRKTSISHDKLLLGAAREAVRALWELNLQKKNTSANLGWKDVCGKEGVLAKALKTRVEMEQVRRKFLCSSSQALKMESSFDATSERECSVCYFDLHLSAAGCHCCPDRYACLDHAKQFCSCALDSRFFLFRYDISELFILVEALEGKLSSIYRWAKLDLGLALTSSISKDKSRCSNSIKSSKETMLPKLRLDSSDLSSSSCGTMLKETTLHPSVVSIEDSHLIDVPIENLSFIKLRKSAEDVIPLGYSKEPSTSNFWTTPSEMTSHERDSEKESVICKSAVENPVCQLPVGGTSSPLSLPLAEHGPKKTPYGHDNVILLSDDETDEPKITETDSKKKLSQRLIGYFDKLSPCNYREDPDGTVPVTDAALKVGNEVPHENMSSHSTYHLHVKQEHDIIKGAVLDSTPVDLSCNIGFGSAESVRQIQASSTRESRDHYLDSSESCPLNPQHSGTVQPKNEDNHEKIGVFSPDNVRAVNGILSCSPNNLGRYYRQKGPRIAKVVRRINCNVEPLEFGIVFAGKSWCNSRTIFPKGFRSRVRYINVLDPTSMCYYISEILDAGRDGPLFMVSLEHHPSEVFIHLSAGRCWELVRERVNLEITKQHKLGRKDLPPLQPPGSIDGFEMFGFSSPAIVQAIEALDQNRVSKEYWDSRPYSRALGQIQQTSRPKENGASADGPFLGGNVQGVHRNEVVPIGIDAVLRSLFKKANEQELNSLCSILCDDNCNTAADGSLVVQLLNEEISSRPR 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03661 1270 Pfam F/Y-rich N-terminus 1040 1081 IPR003888 GO:0005634
Accr2g03661 1270 Gene3D - 1034 1168 - -
Accr2g03661 1270 PANTHER LYSINE-SPECIFIC DEMETHYLASE 141 1054 - -
Accr2g03661 1270 SMART cupin_9 361 524 IPR003347 -
Accr2g03661 1270 Pfam jmjN domain 150 183 IPR003349 -
Accr2g03661 1270 Pfam JmjC domain, hydroxylase 391 507 IPR003347 -
Accr2g03661 1270 Pfam F/Y rich C-terminus 1088 1172 IPR003889 GO:0005634
Accr2g03661 1270 MobiDBLite consensus disorder prediction 12 44 - -
Accr2g03661 1270 ProSiteProfiles FYR domain FYRC motif profile. 1086 1176 IPR003889 GO:0005634
Accr2g03661 1270 ProSiteProfiles JmjC domain profile. 361 524 IPR003347 -
Accr2g03661 1270 FunFam Putative lysine-specific demethylase JMJ16 1032 1170 - -
Accr2g03661 1270 ProSiteProfiles JmjN domain profile. 149 190 IPR003349 -
Accr2g03661 1270 SMART fyrn_3 1040 1084 IPR003888 GO:0005634
Accr2g03661 1270 MobiDBLite consensus disorder prediction 23 44 - -
Accr2g03661 1270 Pfam C5HC2 zinc finger 614 663 IPR004198 -
Accr2g03661 1270 Gene3D Cupin 134 508 - -
Accr2g03661 1270 MobiDBLite consensus disorder prediction 951 984 - -
Accr2g03661 1270 ProSiteProfiles FYR domain FYRN motif profile. 1026 1084 IPR003888 GO:0005634
Accr2g03661 1270 SMART JmjN_1 148 189 IPR003349 -
Accr2g03661 1270 SMART fyrc_3 1090 1184 IPR003889 GO:0005634
Accr2g03661 1270 MobiDBLite consensus disorder prediction 965 980 - -
Accr2g03661 1270 SUPERFAMILY Clavaminate synthase-like 266 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03661 Accr-Chr2 71953258 71960059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03661 1 1268 JUMONJI Transcription Factor Family AT1G08620 53.535 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr2g03661 JmjC 6.4e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03661 K11446 - gmx:100800271 1727.61