Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03642 ATGCAGTCCTTCTTGTTATTCCAATGTTTCATTGCCCTCTCTCTTGTTTGTGCCGAGGGAGCTCAATCTGCATTTAGTGATGAATTGTCAACACTCCTCTCCATCAAATCCAGTCTCGTTGATCCAATGAAGCACCTGAATGATTGGCAGACCCATGATGGTTCATGGCCGTCACCCCACTGTAACTGGACTGGGGTTTGGTGCAACTCTAGAGGCTTCGTAGAGAGGCTCGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCAGACCACATTCAAGCACTTTCAAGTCTGTCCTTTTTCAACATAAGTTGCAACAATTTCGCTTCTTCATTGCCAAGATCACTGTCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTTACTGGCAGCTTTCCTATGGGTCTTGGCAGTGCCACTGGATTGAGATCAATTAACGCGTCAAGTAATAACTTTTCGGGTTTTCTTCCCGAGGATCTTGGGAATGCAACGTTGCTTGAAAGCATTGATTTTCGTGGGGGCTACCTTGAAGGCTCAATTCCCATTAGTTTCAAGAAATTACAGAACCTCAAATTTCTTGGGTTCTCAGGGAATAACTTCACGGGGAACATTCCGGGAGAGCTTGGAGAACTTACTTCTCTAGAGACACTAATTCTTGGGTACAATGCGTTTGAAGGAGGTCTCCCTTCAGAGTTTGGCAACCTCACCAATCTTCAGTACCTAGACTTGGCTGTGGGTAGTCTCAGTGGACAGATTCCACCACAATTGGGTAAGCTGAAAAAGCTTAATACACTATTCTTGTACAGGAACAAGTTTGAAGGAAAGATTCCCCCTGAGATTGGCAACATTACGTCATTGGAGTATCTGGACCTGTCTGATAACTTGATTTCAGGGAATATCCCTGAGGAAATTGTAGAGCTGAAGAACTTGCAGCTATTAAATGTAATGAGAAACAAACTAACAGGTTTCGTACCAGAAAAGCTTGGGGAGCTGAAGAAACTAAAAGTGCTTGAGCTATGGAAAAATTCTTTACAAGGTCCTTTGCCGGAGAACCTTGGACAGAACTCTCCACTGGAGTGGTTGGACGTGTCTTCTAACTCGTTATCAGGTGAAATTCCTCCAGGTTTGTGTGCTTCCGGAAATCTCACTAAACTGATACTTTTCAGTAATTCCTTTTCTGGCTCCATTCCAAGTGGGATTTCAAATTGTTCTTCTTTGGCACGTGTTCGCATTCATAACAATCTTCTATCTGGGACCATTCCAATTGGTTTCGGAAAACTCCCAAATCTTCAAAGGCTGGAATTGGCTAGGAATAACATCACCAGCCAAATTCCAATAGATATCACTTCATCCACTTCGCTTTCTTTCATTGATGTATCTTGGAACCACCTTGAATCATCTCTACCCTCTGGAATTCTCTCTATTCCAACCCTTCAAACCTTCATTGCGTCCAACAACAACTTGGGAGGCAACATACCTGCTGAGTTCCAGGACTGCTTGTCTCTCTCTGTGCTGGATCTTTCAAACAACCTTATATCAGGAGAAATCCCAGAAAGCATTGCTTCTTGCCAAAAACTAGTTCATTTGAACCTCGGGAGCAACCAGTTAACTGGCGAAATCCCGAAATCAACTGCAAACATGCCCACCTTAGCCACTCTTGATCTGTCCCACAATATGCTTTCCGGCCGGATACCTGAAAACCTTGGCAGCTCCCCTGCTCTTGAAACCATCAACCTATCCTACAACAAGCTCGAGGGTCCAGTGCCCTCCAATGGGATTTTGATGACCATAAATCCTAATGATCTCGCCAACAATGCCAATCTCTGCGGAGGCATTCTTCCTCCATGTTCTCAGAGCTCAACTCCGGTAAGTCAGCGAAGGAGCTCACACACAAAGCATATCATGGTTGGTTTTATCTCAGGAATATCAGTAATTGTGTCACTGGGAATTGCATATTTGGGTGGGAGATGGTTGTACAATAAATGGTACTTATACAACAGTTTCGTCCACGATTGGTTCAAAGACAACAGCGAAGAATGGCCTTGGAGATTAGTGGCATTCCAAAGGGTCAGTTTCACAAGCAGTGAGATTCTCGCTTGCATTAAGGAACCAAATATTATAGGCATGGGAGGCACTGGGATTGTGTATAAAGCCGAAATTCATAGACCTCATGCAACAGTAGCAGTGAAGAAACTATGGAGGCCAGGGGCAGACATAGAAGATGGGAATGACGTGTTGAAAGAAGTGAGTCTGTTAGGGAGATTGAGGCATAGGAATATTGTGAGATTGTTGGGGTATGTTCACAACGAAAGGGAAGTGATGATGGTGTACGAGTTCATGCCCAATGGGAATCTTGGGACAGCACTTCATGGAGAGCAAGGAGAAAGGTTACTGGTAGATTGGATTTCAAGGTATAACGTAGCTGTTGGAGTTGCCCAAGGCCTCCATTATCTCCACCATGATTGTCACCCCCCAGTTATTCACAGAGACATCAAGTCTAACAATATACTGCTTGACGCAAATTTGGAGGCAAGGATAGCTGATTTCGGATTAGCAAAAATGCTGATCCATAAGAATGAGACCGTTTCAATGGTGGCTGGATCTTATGGGTACATCGCACCAGAGTATGGATATACTCTGAAAGTGGACGAGAAAATCGACATATACAGTTACGGCGTAGTGCTTCTGGAGCTCGTAACAGGGAAAAAACCTTTGGACCTGTCATTCGAAGAATGTGGAGACATAGTCGAATGGGTAAGAAAGAAAAGAAGCAATGGAGGGTTGGAAGAAGCACTAGATCCCACCATAGCGGGAAGGTGCAGGCACGTCCAAGAAGAGATGCTTCTTGTGCTCCGAATTGCACTTCTCTGTACGGCAAAGCTTCCAAAGGAAAGACCATCCATGAGAGACATAGTGACGATGCTGGGAGAGGCAAAACCCAGAAGAAAAAGCACCACTCAAAATGGAACACAGGACGTCTTCACCGCCTCTCCCATCATAAGCCTTCTCTAG 3024 0.4461 MQSFLLFQCFIALSLVCAEGAQSAFSDELSTLLSIKSSLVDPMKHLNDWQTHDGSWPSPHCNWTGVWCNSRGFVERLDLSNMNLSGRVSDHIQALSSLSFFNISCNNFASSLPRSLSNLTSLKSFDVSQNYFTGSFPMGLGSATGLRSINASSNNFSGFLPEDLGNATLLESIDFRGGYLEGSIPISFKKLQNLKFLGFSGNNFTGNIPGELGELTSLETLILGYNAFEGGLPSEFGNLTNLQYLDLAVGSLSGQIPPQLGKLKKLNTLFLYRNKFEGKIPPEIGNITSLEYLDLSDNLISGNIPEEIVELKNLQLLNVMRNKLTGFVPEKLGELKKLKVLELWKNSLQGPLPENLGQNSPLEWLDVSSNSLSGEIPPGLCASGNLTKLILFSNSFSGSIPSGISNCSSLARVRIHNNLLSGTIPIGFGKLPNLQRLELARNNITSQIPIDITSSTSLSFIDVSWNHLESSLPSGILSIPTLQTFIASNNNLGGNIPAEFQDCLSLSVLDLSNNLISGEIPESIASCQKLVHLNLGSNQLTGEIPKSTANMPTLATLDLSHNMLSGRIPENLGSSPALETINLSYNKLEGPVPSNGILMTINPNDLANNANLCGGILPPCSQSSTPVSQRRSSHTKHIMVGFISGISVIVSLGIAYLGGRWLYNKWYLYNSFVHDWFKDNSEEWPWRLVAFQRVSFTSSEILACIKEPNIIGMGGTGIVYKAEIHRPHATVAVKKLWRPGADIEDGNDVLKEVSLLGRLRHRNIVRLLGYVHNEREVMMVYEFMPNGNLGTALHGEQGERLLVDWISRYNVAVGVAQGLHYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKKPLDLSFEECGDIVEWVRKKRSNGGLEEALDPTIAGRCRHVQEEMLLVLRIALLCTAKLPKERPSMRDIVTMLGEAKPRRKSTTQNGTQDVFTASPIISLL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03642 1007 ProSiteProfiles Leucine-rich repeat profile. 289 311 IPR001611 GO:0005515
Accr2g03642 1007 FunFam MDIS1-interacting receptor like kinase 1 788 997 - -
Accr2g03642 1007 SUPERFAMILY L domain-like 58 306 - -
Accr2g03642 1007 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Accr2g03642 1007 SUPERFAMILY Protein kinase-like (PK-like) 701 979 IPR011009 -
Accr2g03642 1007 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Accr2g03642 1007 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Accr2g03642 1007 Gene3D Ribonuclease Inhibitor 311 624 IPR032675 -
Accr2g03642 1007 ProSiteProfiles Leucine-rich repeat profile. 505 527 IPR001611 GO:0005515
Accr2g03642 1007 SMART serkin_6 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03642 1007 ProSiteProfiles Protein kinase domain profile. 705 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03642 1007 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Accr2g03642 1007 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Accr2g03642 1007 Gene3D Ribonuclease Inhibitor 184 254 IPR032675 -
Accr2g03642 1007 Gene3D Transferase(Phosphotransferase) domain 1 788 1002 - -
Accr2g03642 1007 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 25 178 - -
Accr2g03642 1007 Gene3D Ribonuclease Inhibitor 255 310 IPR032675 -
Accr2g03642 1007 Pfam Protein kinase domain 709 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03642 1007 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Accr2g03642 1007 Pfam Leucine rich repeat 480 540 IPR001611 GO:0005515
Accr2g03642 1007 FunFam MDIS1-interacting receptor like kinase 1 705 787 - -
Accr2g03642 1007 Pfam Leucine Rich repeat 288 302 IPR001611 GO:0005515
Accr2g03642 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Accr2g03642 1007 Gene3D Phosphorylase Kinase; domain 1 705 787 - -
Accr2g03642 1007 SMART LRR_typ_2 431 455 IPR003591 -
Accr2g03642 1007 SMART LRR_typ_2 551 575 IPR003591 -
Accr2g03642 1007 SMART LRR_typ_2 95 119 IPR003591 -
Accr2g03642 1007 SMART LRR_typ_2 215 238 IPR003591 -
Accr2g03642 1007 SMART LRR_typ_2 287 311 IPR003591 -
Accr2g03642 1007 SMART LRR_typ_2 335 359 IPR003591 -
Accr2g03642 1007 SUPERFAMILY RNI-like 252 602 - -
Accr2g03642 1007 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Accr2g03642 1007 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 170 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03642 Accr-Chr2 71788415 71791684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03642 4 1007 Receptor kinase-like Gene Family AT1G08590 63.220 0.0 1251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr2g03642 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03642 - - gmx:100817339 1545.41