Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g03618 | ATGGCGAGCCAGGTGGTCAAAGTGAAGAGGGAGACGCTAGAAGCATGCATGACATGCCCTCTTTGTCATAAACTGTTGAAGGACGCTACTACCATCTCTCTCTGCCTTCATACGTTCTGCAGGAAATGCATATACGAGAGATTCTCAGATGAGGAGACAGATTGCTGTCCAGTATGCAATATTGATTTGGGCTGTCTTCCGGTGGAGAAACTGAGGCCAGATCACAATTTGCAAGATATTAGGGCCAAAATTTTCCCTTTAAGACGAAGAAAAATTAAGGCCCCACAGGCAATACCTTCAATACCTCTGCCAGCAAAAAGGAAGGAAAGATCACTTTCATCATTGGTGATTTCTGCTCCTAAAGTTCCAATGCAGACCGGCTTCACAGGAAAGAGAACAAAAACTGGTACAAGAAAGGCTGCTGCTTTGCGTGGATGCAGTTTTGCTGTTCATGAATCCATAAAGAAGGAAGAAGTCTATACCGAGGATAACCCAGATTCTTCCACAGCTGAGCCTTCGAAGAAGAATAGGCCTAATGAAGAAACAGAGAACAATGGGGAGCTTCCAGAAGGGAAACTTGATCTCTGGACACCCTTGAACTGTCTTGTTGAAGCTGCCAACAGAACAAAATCCTCAAAGTCAACTTCGCAAGGTTTGTCGCTTGCCAAATCTGAGCCTCCAACTTCTCCCAATGGTGGAATAAATATGCCTGAAATAACAACCAAATCAGAGCCACCTGCTACTGTCCATAGTGAAGTACGTATGCCTAAAACCAAAAACAAGGATGATGGACATAAAACAAAATTTGGAGATGACAAGGATGAAAAAAATGTGCCTCCGGGACAAGTGAGACGGAGAAGAGTGCGTCCAGCTGGTCAGAAAAGAGCTGCAGCATCTGAGATTTCTGCCTCAGCCCAAGTTATGCTAGATGCAGCTGGGGGCAGGGGTAACAGAGAAAACTGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGACCAGAAAGGAGATGTTCCCTTGCCACAGATTTCAGCATCCTACTTAAGAATAAAGGATAGTACGGTGCCCGTCTCCTCTATTCAAAAGTACCTTGTTAAGAAACTTAATCTTGCCAGCGAAGCAGAGGTGGAAATAATGTGCCGTGGTCGACCAGTTATACCATCTTTGCAACTGCATAACTTAGTTGATCTTTGGTTCAAGGCTCCATCGTACTCTAAAAAGTTTCCTGCTTCTGTTGGCTCCTCCGCCAAGGACTTCGTTATGGTCTTATCATATTCTCGAAAGGCCCTCCCTCCTTAG | 1296 | 0.4468 | MASQVVKVKRETLEACMTCPLCHKLLKDATTISLCLHTFCRKCIYERFSDEETDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPLRRRKIKAPQAIPSIPLPAKRKERSLSSLVISAPKVPMQTGFTGKRTKTGTRKAAALRGCSFAVHESIKKEEVYTEDNPDSSTAEPSKKNRPNEETENNGELPEGKLDLWTPLNCLVEAANRTKSSKSTSQGLSLAKSEPPTSPNGGINMPEITTKSEPPATVHSEVRMPKTKNKDDGHKTKFGDDKDEKNVPPGQVRRRRVRPAGQKRAAASEISASAQVMLDAAGGRGNRENCPIWFSLVASEDQKGDVPLPQISASYLRIKDSTVPVSSIQKYLVKKLNLASEAEVEIMCRGRPVIPSLQLHNLVDLWFKAPSYSKKFPASVGSSAKDFVMVLSYSRKALPP | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g03618 | 431 | Pfam | Zinc finger, C3HC4 type (RING finger) | 19 | 59 | - | - | |
Accr2g03618 | 431 | SUPERFAMILY | RING/U-box | 12 | 84 | - | - | |
Accr2g03618 | 431 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 110 | IPR013083 | - | |
Accr2g03618 | 431 | MobiDBLite | consensus disorder prediction | 157 | 193 | - | - | |
Accr2g03618 | 431 | MobiDBLite | consensus disorder prediction | 157 | 188 | - | - | |
Accr2g03618 | 431 | ProSitePatterns | Zinc finger RING-type signature. | 35 | 44 | IPR017907 | - | |
Accr2g03618 | 431 | Gene3D | - | 307 | 400 | - | - | |
Accr2g03618 | 431 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 429 | IPR044807 | GO:0004842 | |
Accr2g03618 | 431 | ProSiteProfiles | Zinc finger RING-type profile. | 19 | 60 | IPR001841 | - | |
Accr2g03618 | 431 | MobiDBLite | consensus disorder prediction | 208 | 247 | - | - | |
Accr2g03618 | 431 | SMART | ring_2 | 19 | 59 | IPR001841 | - | |
Accr2g03618 | 431 | CDD | RING-HC_PCGF | 17 | 60 | - | - | |
Accr2g03618 | 431 | MobiDBLite | consensus disorder prediction | 208 | 299 | - | - | |
Accr2g03618 | 431 | MobiDBLite | consensus disorder prediction | 254 | 282 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g03618 | Accr-Chr2 | 71643700 | 71647743 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g03618 | 5 | 350 | C3H Transcription Factor Family | AT2G30580 | 44.505 | 5.73e-87 | 266 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g03618 | K16277 | - | gmx:100783999 | 640.188 |