Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03613 ATGACGACAGGGTTGAAAGAGGCAGAACCAGATAAGTACAGCATGATAAACTTTGAAGAGACCGAGTTACGACTCGGATTGCCCGGTGCTTCATCTGACGCCGAGTCTACGCTCAAGCCCACCTGGGGTGCCGGTGCCAAGAGAGGCTTCTCCGACACCTCTGTGGATTTGAAGCTCAATCTTTCTTCCAACAGCACTATTGCTCACAAGCCAACCGACAACACAGCTGCTGCTTCTCCCTCTAACGATCCCGCCAAGCCACCCGCTATGGCACAAGTGGTGGGTTGGCCACCGGTGAGATCATCGAGGAAGAACATAGGGACATCACAGAACCAAAAGAAGAAAGAAGAAGGAGCAGCGTTCGTGAAGGTGAGCATGGACGGCGCGCCTTATCTGCGCAAAGTGGACTTGAAACTGTACAAAAGCTACCAACAACTGTCAGACGCCCTTGCCAAAATGTTCGGCTCCTTCACTAACGCCCCTCCTCAGGCCACCAAGGACTTCCTCAACGAGAGCAAATTGATCGATCTTTTGAGCGGCTCCGACTACGTCCCCACTTATGAGGATAAGGACGGCGATTGGATGCTCGTCGGCGACGTCCCCTGGGACATGTTCGTGCAATCTTGCAAACGCCTCCGCATCATGAAAGGATCCGACGCAATTGGGCTAGCGTCAAGGGCGGTGGAAAAATGCAAGAATAGAAGCTGA 708 0.5297 MTTGLKEAEPDKYSMINFEETELRLGLPGASSDAESTLKPTWGAGAKRGFSDTSVDLKLNLSSNSTIAHKPTDNTAAASPSNDPAKPPAMAQVVGWPPVRSSRKNIGTSQNQKKKEEGAAFVKVSMDGAPYLRKVDLKLYKSYQQLSDALAKMFGSFTNAPPQATKDFLNESKLIDLLSGSDYVPTYEDKDGDWMLVGDVPWDMFVQSCKRLRIMKGSDAIGLASRAVEKCKNRS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03613 235 Gene3D - 113 229 - -
Accr2g03613 235 MobiDBLite consensus disorder prediction 65 81 - -
Accr2g03613 235 ProSiteProfiles PB1 domain profile. 119 217 IPR000270 GO:0005515
Accr2g03613 235 MobiDBLite consensus disorder prediction 65 116 - -
Accr2g03613 235 MobiDBLite consensus disorder prediction 28 50 - -
Accr2g03613 235 FunFam Auxin-responsive protein 114 227 - -
Accr2g03613 235 Pfam AUX/IAA family 21 226 IPR033389 -
Accr2g03613 235 SUPERFAMILY CAD & PB1 domains 113 216 - -
Accr2g03613 235 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 17 222 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03613 Accr-Chr2 71587588 71591811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03613 59 226 B3 DNA Binding Superfamily AT3G61830 26.744 4.32e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr2g03613 AUX_IAA 2.6e-75 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03613 K14484 - gmx:100796888 317.39