LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g03608	ATGGATAGAGTGTTTTCAGTGGAGGAAATTTCTGAACAGTTTTGGTCGTCGCCGGTCCCCACCGTGAAGGATGAATCCTCCTCCGGGATGAATCGCAGTGCTTCCGAATGGGCCTTCCAACGATTTCTCCAAGAAGCTTCTGCAGCGTCCCATGCCTCTCACCATTCTTCCTCCGATCCTGACAAAAACGACGACTCTAGCCTTGAGATTAAGGAACAGCCCAAACCCAAGCAGGAGCTCACGGCGTCATCCATTCCCAACAATGCTGCTGTCTTCTCCAATGCACCTTCTCTTACCATCCCTGTTGATTCCGAGCAGTACCAGGCTATCCTCAAGAGCAAACTCAATCTCGCTTGCGCCGCGGTCGCCTTGACTCGGGGTTCTTTAGCCAAGTCCCAAGATCCAGCCACTTTACCAAATGGCGTATCAAAGGCTAATAAAACTTCTCCAGCTAGATCTCCTGCTACTTTAGAAGGACATGGTCCATCTAATGTACATGATAAAGATGCGGAAGGGCCAGTTGGAATTCCTTCATTACCTGCCGCTCAAAAGAAACTGGCAATTGCAACCAAGCCAGCAACCAGCGGATCATCGAGGGATCAGTCTGATGACGAGGAAGCCGAAGAAGAGACTGATATGACTGAAAATATGGACCCCGCAGATGCAAAACGAGTTAGGAGGATGCTTTCCAATAGGGAGTCGGCTAGACGCTCGAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAAACACAGGTTGCACAATTAAAAGTAGAAAACTCATCATTGTTAAAGCGTCTTACTGATGTAAGCCAAAAGCACAATGAAGCTGCTGTTGACAACAGGGTCTTGAAAGCTGATGTCGAAACATTAAGAGCAAAGGTAAAGATGGCCGAAGAGACTGTGAAAAGAATAACTGGGTTAAACCCAATGTTCAATGCGATGTCTGAGGTATCATCGATGGGCCTGCCATCATATGATGGAAGCCTTTCCGACACATCAGATGCAGCTGTACCTGGGCAAGATGACCCAAGCCATAACTTCTATCAACCCGCTTCTAATAATTCTTTGTCCAAGCCTGAGTCAAGAGTCAACAATGGACTTGGAGAAATTTCTTCCATGGAAAACGCGCAGCAGAGCCCCGCGGCTATGGTAACTGGAAACAAGATGGGGCGAACAGCTTCCTTGCAACGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATCCGCGGGGGTGCAGATTCTTGTGGTCCGCTTGGCAATGGAGAGCAGTAA	1275	0.4839	MDRVFSVEEISEQFWSSPVPTVKDESSSGMNRSASEWAFQRFLQEASAASHASHHSSSDPDKNDDSSLEIKEQPKPKQELTASSIPNNAAVFSNAPSLTIPVDSEQYQAILKSKLNLACAAVALTRGSLAKSQDPATLPNGVSKANKTSPARSPATLEGHGPSNVHDKDAEGPVGIPSLPAAQKKLAIATKPATSGSSRDQSDDEEAEEETDMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLKVENSSLLKRLTDVSQKHNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEVSSMGLPSYDGSLSDTSDAAVPGQDDPSHNFYQPASNNSLSKPESRVNNGLGEISSMENAQQSPAAMVTGNKMGRTASLQRVASLEHLQKRIRGGADSCGPLGNGEQ	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g03608	424	Gene3D	-	222	276	-	-
	Accr2g03608	424	SMART	brlzneu	219	283	IPR004827	GO:0003700\|GO:0006355
	Accr2g03608	424	SUPERFAMILY	Leucine zipper domain	223	272	IPR046347	GO:0003700\|GO:0006355
	Accr2g03608	424	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	221	273	IPR004827	GO:0003700\|GO:0006355
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	46	87	-	-
	Accr2g03608	424	Pfam	bZIP transcription factor	222	271	IPR004827	GO:0003700\|GO:0006355
	Accr2g03608	424	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	226	241	IPR004827	GO:0003700\|GO:0006355
	Accr2g03608	424	PANTHER	BASIC LEUCINE ZIPPER 63	1	413	-	-
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	55	76	-	-
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	325	383	-	-
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	10	30	-	-
	Accr2g03608	424	Coils	Coil	281	301	-	-
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	129	223	-	-
	Accr2g03608	424	CDD	bZIP_plant_GBF1	224	275	IPR045314	GO:0003700\|GO:0006355
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	130	153	-	-
	Accr2g03608	424	Coils	Coil	232	266	-	-
	Accr2g03608	424	MobiDBLite	consensus disorder prediction	1	30	-	-
	Accr2g03608	424	FunFam	BZIP transcription factor	221	272	-	-
	Accr2g03608	424	Pfam	Basic leucine-zipper C terminal	290	413	IPR020983	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g03608	Accr-Chr2	71554541	71557882	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g03608	1	312	bZIP Transcription Factor Family	AT4G02640	40.122	6.01e-50	172

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Accr2g03608		bZIP_C	9.5e-41	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g03608	K25784		-	qsa:O6P43_007630	495.352