LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g03591	ATGGCATCCGTGCAACACACCGTTTTCCCCGAAGAGGACCTTGACGAGGACGACGACGAATCTCAAGAGGACGAAGACGACGACGAGGACGACGACGTTCTTGGTGAGCCTGAAGACGAAGAAGATCGTGATGCTTCTCCTTCCACCTCTTCTGCCCTCCCCGTCCCCTCCTCCACCGTCACTGTCGCTGTACCCGGTTCTGCTGTCTCGAACGGCGCTCCTGCCCCGATTTCCATGACTGCCTCCACCACAATTGTCGTCCCCGACACCGTCGATCCCAAGCGTCAGCGAATTGACTCCGGCGAAGAGAAAAAGCCTCTGGATGATTCACGCAGACTTTTTCAACGCCTTTGGACCGATGAGGACGAGATCGAGCTCTTGCAGGGCTTCCTTGACTACACCACACAGCGAGGATCCTCCCACCACAATGATACCGCCTTGTTTTATGACCAAATCAAGTCCAAGCTTCAGATCGACTTCAACAAAAACCAACTTGTTGAGAAGCTCCGCAGGTTGAAGAAGAAATACCGCAATCTTTTGAATAAGATTAGCGCCGGCAAAGAATTGTCCTTTAAGAGCCCTCACGATCAAGCCACCTTCGAAATTTCTCGTAAGATCTGGAGCAATTTGGGTTCAACTGGCGCTGCTGCCGAAGATACCGCCTTGGATGACGACGAAATCAGTCCCAACCCTAACCCTAACCCTAATTTTAGCCACTCACAGCCTAAGAATGAGGTAATTATCGGGACTCCTGCGGAGAAGAGGACGCCATCGTCCCGGAAGCGTTCACGGTCTCGATCCCGGATCACAGCCGATGAGAAACGCGACTTGAATGATGGATTGGCGTCAAACAAAGATAATTATTGTATTAGTAATAGTAATGCTACTACTAATAATAATCTTAACAACCACCATAGCATACCAGGCTTGATCGAGGAGACGGTGAGGAGTTGTCTGTCGCCCTTGTTAAAGGATATACTGAGCAGTGCCATGGGTGGCCCATTTGGGGCCAGGGGTTTTGGAGGATTGGCATTAAATCCTATGCCATTGAGCTTCGGTGTGCCATCCTTGATGAATTACAGCAGCGGAGAAACGGTAGATGAGAAGTGGAGGAAGCAACAAATTCTGGAGTTGGAGGTGTACTCGAAGCGGCTGGAGTTGGTGCAGGATCAGATCAAGGCTGCGTTGGAGGAGTTGCGATCCACTGGACGATGA	1215	0.5086	MASVQHTVFPEEDLDEDDDESQEDEDDDEDDDVLGEPEDEEDRDASPSTSSALPVPSSTVTVAVPGSAVSNGAPAPISMTASTTIVVPDTVDPKRQRIDSGEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTTQRGSSHHNDTALFYDQIKSKLQIDFNKNQLVEKLRRLKKKYRNLLNKISAGKELSFKSPHDQATFEISRKIWSNLGSTGAAAEDTALDDDEISPNPNPNPNFSHSQPKNEVIIGTPAEKRTPSSRKRSRSRSRITADEKRDLNDGLASNKDNYCISNSNATTNNNLNNHHSIPGLIEETVRSCLSPLLKDILSSAMGGPFGARGFGGLALNPMPLSFGVPSLMNYSSGETVDEKWRKQQILELEVYSKRLELVQDQIKAALEELRSTGR	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g03591	404	MobiDBLite	consensus disorder prediction	227	245	-	-
	Accr2g03591	404	MobiDBLite	consensus disorder prediction	1	58	-	-
	Accr2g03591	404	PANTHER	BNAANNG10740D PROTEIN-RELATED	16	398	IPR007592	GO:0006355
	Accr2g03591	404	MobiDBLite	consensus disorder prediction	11	43	-	-
	Accr2g03591	404	MobiDBLite	consensus disorder prediction	222	284	-	-
	Accr2g03591	404	Coils	Coil	162	189	-	-
	Accr2g03591	404	MobiDBLite	consensus disorder prediction	265	281	-	-
	Accr2g03591	404	Coils	Coil	378	398	-	-
	Accr2g03591	404	Pfam	Protein of unknown function, DUF573	114	208	IPR007592	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g03591	Accr-Chr2	71413408	71414622	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g03591	11	401	GeBP Transcription Factor Family	AT5G28040	43.692	1.56e-90	278

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Accr2g03591		DUF573	9.5e-35	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g03591	-		-	pcin:129289843	613.609