Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03574 ATGGGGTGTGTGATTAGTCGAGAAGTGTCATCGGGAATTATCTCTGAGGTGAAAGAGGAGAAGAATTTAAGTGGCGAGTCGAGGAGGAAGGTAGATGAAACTTCGTCTCAGAGCGCGGTTGAGGCTCAGAACGGTGGGAAACAAAATGAAGAGAAGGGTGGTGGTGATGAAGGGATCCAGGCCCAACGGCCAAGGGGCGAAAGGAGGAGATCAAAGCCAAACCCAAGGCTAAGTAATCCTCCCAAACATGTGCGAGGAGAGCAAGCAGCAGCTGGATGGCCGCCCTGGCTTACGGCTGTTTGTGGTGAAGCCCTTAGTGGATGGATTCCCCGAAAGGCTGACACATTTGAGAAAATTGACAAGATTGGCCAAGGAACGTATAGCAATGTGTACAAGGCTAAAGATATGTTGACGGGTAAGATTGTTGCTCTTAAGAAGGTTCGGTTCGACAATTTGGAGCCTGAGAGTGTAAAGTTCATGGCTAGAGAAATTCTAATTCTTAGAAGATTGGATCACCCCAATGTTGTAAAGTTGGAAGGCTTAGTTACATCAAGGATGTCATGTAGTCTGTATCTGGTATTTGATTATATGGTGCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTCACTGAGCCTCAGGTCAAATGTTACATGCATCAACTACTTTCTGGACTTGAGCATTGTCATAAACGGCACATACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACGATGAGGGAGTACTTAAGATTGCTGACTTCGGACTGGCTTCTTTCTTTGATCCAAACCACAAACACCCCATGACTAGTCGTGTGGTTACACTTTGGTATCGGCCTCTTGAGTTGCTCCTTGGTGCCACGGATTATGGTGTGGGTATTGATCTTTGGAGTGCAGGTTGTATTTTAGGGGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTAGAGCAACTGCATAAGATATACAAACTATGTGGCTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTCATGCTACCTTATTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACGTTTAAAGATTTTCCACCTTCTGCACTGCCCCTTATCGACACACTTCTTGCCATTGATCCAGCAGAAAGGAAGACAGCCTCGGATGCATTAAATAGTGAGTTCTTCACAACAGAACCGTTTGCTTGTGATCCTTCTAATCTTCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGGCGGGATGATGAAGCAAGGAGATTAAGAGCTGCAAGCAAAGCTCAGGTTGACAGTACAAAGAAAACTCGAGCACGCGGTGCTAAAGCATTTCATGCCCCTGAAGCCAATGCTGAGCTTCAGTCTAATATTGATAGAAGGCGGCTAATCAGTCACGCTAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCGCCACATCAAGATGGGCAACTTGGGTATACTTTGGGAGCTTCGAATCATATAGATCCTGACATTGTTCCTCCTGATGTCGCCTTCAGTTCAACTTCATTTACTTATTCAAAAGAACCGTTCCAAGCTTGGTCAGGTCCCATAGGTAATACTGCTGCCATTGATGCACCAAAGAAGAAGAAGAAACTCACAGCAGCTGATACATTGGATTTATCAAAACCACACAGAGTTTACACCAAGGATAAGGTTAAAGGAAAGAAAATCAAAGCCTAG 1734 0.4475 MGCVISREVSSGIISEVKEEKNLSGESRRKVDETSSQSAVEAQNGGKQNEEKGGGDEGIQAQRPRGERRRSKPNPRLSNPPKHVRGEQAAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMVHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHKRHILHRDIKGSNLLIDDEGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPLELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPHATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALNSEFFTTEPFACDPSNLPKYPPSKEMDAKRRDDEARRLRAASKAQVDSTKKTRARGAKAFHAPEANAELQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGYTLGASNHIDPDIVPPDVAFSSTSFTYSKEPFQAWSGPIGNTAAIDAPKKKKKLTAADTLDLSKPHRVYTKDKVKGKKIKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03574 577 MobiDBLite consensus disorder prediction 18 89 - -
Accr2g03574 577 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Accr2g03574 577 CDD STKc_CDK9_like 116 400 - -
Accr2g03574 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Accr2g03574 577 MobiDBLite consensus disorder prediction 50 74 - -
Accr2g03574 577 MobiDBLite consensus disorder prediction 410 453 - -
Accr2g03574 577 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
Accr2g03574 577 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Accr2g03574 577 Gene3D Transferase(Phosphotransferase) domain 1 199 440 - -
Accr2g03574 577 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03574 577 MobiDBLite consensus disorder prediction 18 35 - -
Accr2g03574 577 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03574 577 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03574 577 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Accr2g03574 577 MobiDBLite consensus disorder prediction 418 453 - -
Accr2g03574 577 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Accr2g03574 577 SUPERFAMILY Protein kinase-like (PK-like) 111 406 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03574 Accr-Chr2 71266914 71270657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03574 108 440 Core Cell Cycle Gene Families AT5G10270 51.862 2.85e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr2g03574 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03574 K08819 - gmx:100817289 979.548