Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g03558 | ATGGCGAATGGCGGTGACATGGCCTCCCATAATGTAGGTTGCTTATGTAACAGTAAAATGGATTCCGTCAACAACATAAAGACAGTCCCAGCGAACGATGATTCTTTAGTCAAACATAATAAACGAAGCTTTCTGTTTCGTTCCTCCACTTCTGCCCAAGACTTGAGGCATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAGGTCTGCTATCGTGACTTTGATTCTTCTCTACAATCATCCGAAATGGAGGACCGTTGTTCAATGTCCAACAGGGCACAAATTAGTTGGAGCAAATATTTCAAAAATTTGAAAAAGAGATCAATGAAGCGTCTAGCCTCCTTCCCTTTTCATGTTGCGCCAACGGTACCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTGCGTTGACTAATAATGCATACAAGTTCAGATCTTCATTGGCGAACTTCACACTCTCTGATTTGAGAAATGCAACCAACCATTTTAGTAATGAAAATTTGATTGGAAGAGGTGGCTATTCTGAAGTTTACTGGGGTCGTCTCAAAGATGGTTGTCTAGTAGCTATCAAGAGACTAACTAAAGGGACTCCAGACGAGAGGACTGCAAGCTTTCTATCTGAGTTGGGCATTATTGCTCATGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCCCCGCTCGGAAGCTTAGGATCTCTCCTTCAAGGTCCAAGTAAAAACAAGTTAGATTGGAGTAAAAGGTATAAGATTGCTCTGGGCATAGCCAATGGCCTTCTTTACCTTCATGAGTGCTGTCACCGGCGAATCATTCATAGAGATATCAAATCAGATAATATCCTGCTCACTGAAAGCTTTGAGCCACAGATTTGTGATTTTGGGATGGCAAAATGGTTACCCAGACAATTAAGCCACCATAATGTATCAAAGTTTGAAGGCACATTTGGGTATTTTGCTCCTGAATATTTCATGCATGGCATAGTGGACGAGAAAACTGATGTTTATTCTTTTGGGGTTATACTGTTGGAGCTTATAACTGGGCGCCCAGCAGTGGATGAAAATCAGCTCAGTGTTGTACTATGGGCAAAGCCTTTGCTTGATGATGATAATATGAAGGACCTTGTTGATCCTTGTCTTGGGAACGACTTTGACAGAGAACAGATGGATCGGGTTGTTCTGACAGCATCCCTGTGCGTGGAGCACTCCGCTGTCTTACGTCCCTGCATGAGTCAGGCTGCAATGCTGCTAAGGAATGATGACTATGCAAGGGAATCTACAAATGCAAACCGGAGGCGGTCTTTCCTTAGAACATACTCACAAGAGCTTCTGGATGCACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAATCAACACAAGAAGATTGCCCTGGGATCTTGA | 1461 | 0.4251 | MANGGDMASHNVGCLCNSKMDSVNNIKTVPANDDSLVKHNKRSFLFRSSTSAQDLRHFELEKEKEDVSSPRGVLEVCYRDFDSSLQSSEMEDRCSMSNRAQISWSKYFKNLKKRSMKRLASFPFHVAPTVPKGKSKSSRENPALTNNAYKFRSSLANFTLSDLRNATNHFSNENLIGRGGYSEVYWGRLKDGCLVAIKRLTKGTPDERTASFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSPLGSLGSLLQGPSKNKLDWSKRYKIALGIANGLLYLHECCHRRIIHRDIKSDNILLTESFEPQICDFGMAKWLPRQLSHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVILLELITGRPAVDENQLSVVLWAKPLLDDDNMKDLVDPCLGNDFDREQMDRVVLTASLCVEHSAVLRPCMSQAAMLLRNDDYARESTNANRRRSFLRTYSQELLDAQEYNSTKYLNDLNQHKKIALGS | 486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g03558 | 486 | ProSiteProfiles | Protein kinase domain profile. | 170 | 423 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g03558 | 486 | PANTHER | OS08G0249100 PROTEIN | 42 | 479 | IPR046958 | - | |
Accr2g03558 | 486 | Gene3D | Phosphorylase Kinase; domain 1 | 131 | 242 | - | - | |
Accr2g03558 | 486 | SUPERFAMILY | Protein kinase-like (PK-like) | 151 | 435 | IPR011009 | - | |
Accr2g03558 | 486 | Gene3D | Transferase(Phosphotransferase) domain 1 | 246 | 459 | - | - | |
Accr2g03558 | 486 | SMART | serkin_6 | 170 | 423 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g03558 | 486 | ProSitePatterns | Protein kinases ATP-binding region signature. | 176 | 198 | IPR017441 | GO:0005524 | |
Accr2g03558 | 486 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 289 | 301 | IPR008271 | GO:0004672|GO:0006468 | |
Accr2g03558 | 486 | Pfam | Protein kinase domain | 171 | 372 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g03558 | 486 | FunFam | receptor-like cytosolic serine/threonine-protein kinase RBK2 | 246 | 449 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g03558 | Accr-Chr2 | 71132865 | 71136042 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g03558 | 158 | 469 | Trihelix Transcription Factor Family | AT5G38560 | 41.791 | 5.37e-70 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Accr2g03558 | Pkinase | 4.5e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g03558 | - | - | gmx:100781529 | 610.912 |