Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03558 ATGGCGAATGGCGGTGACATGGCCTCCCATAATGTAGGTTGCTTATGTAACAGTAAAATGGATTCCGTCAACAACATAAAGACAGTCCCAGCGAACGATGATTCTTTAGTCAAACATAATAAACGAAGCTTTCTGTTTCGTTCCTCCACTTCTGCCCAAGACTTGAGGCATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAGGTCTGCTATCGTGACTTTGATTCTTCTCTACAATCATCCGAAATGGAGGACCGTTGTTCAATGTCCAACAGGGCACAAATTAGTTGGAGCAAATATTTCAAAAATTTGAAAAAGAGATCAATGAAGCGTCTAGCCTCCTTCCCTTTTCATGTTGCGCCAACGGTACCAAAAGGGAAAAGCAAAAGCAGTAGAGAAAATCCTGCGTTGACTAATAATGCATACAAGTTCAGATCTTCATTGGCGAACTTCACACTCTCTGATTTGAGAAATGCAACCAACCATTTTAGTAATGAAAATTTGATTGGAAGAGGTGGCTATTCTGAAGTTTACTGGGGTCGTCTCAAAGATGGTTGTCTAGTAGCTATCAAGAGACTAACTAAAGGGACTCCAGACGAGAGGACTGCAAGCTTTCTATCTGAGTTGGGCATTATTGCTCATGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCCCCGCTCGGAAGCTTAGGATCTCTCCTTCAAGGTCCAAGTAAAAACAAGTTAGATTGGAGTAAAAGGTATAAGATTGCTCTGGGCATAGCCAATGGCCTTCTTTACCTTCATGAGTGCTGTCACCGGCGAATCATTCATAGAGATATCAAATCAGATAATATCCTGCTCACTGAAAGCTTTGAGCCACAGATTTGTGATTTTGGGATGGCAAAATGGTTACCCAGACAATTAAGCCACCATAATGTATCAAAGTTTGAAGGCACATTTGGGTATTTTGCTCCTGAATATTTCATGCATGGCATAGTGGACGAGAAAACTGATGTTTATTCTTTTGGGGTTATACTGTTGGAGCTTATAACTGGGCGCCCAGCAGTGGATGAAAATCAGCTCAGTGTTGTACTATGGGCAAAGCCTTTGCTTGATGATGATAATATGAAGGACCTTGTTGATCCTTGTCTTGGGAACGACTTTGACAGAGAACAGATGGATCGGGTTGTTCTGACAGCATCCCTGTGCGTGGAGCACTCCGCTGTCTTACGTCCCTGCATGAGTCAGGCTGCAATGCTGCTAAGGAATGATGACTATGCAAGGGAATCTACAAATGCAAACCGGAGGCGGTCTTTCCTTAGAACATACTCACAAGAGCTTCTGGATGCACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAATCAACACAAGAAGATTGCCCTGGGATCTTGA 1461 0.4251 MANGGDMASHNVGCLCNSKMDSVNNIKTVPANDDSLVKHNKRSFLFRSSTSAQDLRHFELEKEKEDVSSPRGVLEVCYRDFDSSLQSSEMEDRCSMSNRAQISWSKYFKNLKKRSMKRLASFPFHVAPTVPKGKSKSSRENPALTNNAYKFRSSLANFTLSDLRNATNHFSNENLIGRGGYSEVYWGRLKDGCLVAIKRLTKGTPDERTASFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSPLGSLGSLLQGPSKNKLDWSKRYKIALGIANGLLYLHECCHRRIIHRDIKSDNILLTESFEPQICDFGMAKWLPRQLSHHNVSKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVILLELITGRPAVDENQLSVVLWAKPLLDDDNMKDLVDPCLGNDFDREQMDRVVLTASLCVEHSAVLRPCMSQAAMLLRNDDYARESTNANRRRSFLRTYSQELLDAQEYNSTKYLNDLNQHKKIALGS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03558 486 ProSiteProfiles Protein kinase domain profile. 170 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03558 486 PANTHER OS08G0249100 PROTEIN 42 479 IPR046958 -
Accr2g03558 486 Gene3D Phosphorylase Kinase; domain 1 131 242 - -
Accr2g03558 486 SUPERFAMILY Protein kinase-like (PK-like) 151 435 IPR011009 -
Accr2g03558 486 Gene3D Transferase(Phosphotransferase) domain 1 246 459 - -
Accr2g03558 486 SMART serkin_6 170 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03558 486 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Accr2g03558 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Accr2g03558 486 Pfam Protein kinase domain 171 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g03558 486 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 246 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03558 Accr-Chr2 71132865 71136042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03558 158 469 Trihelix Transcription Factor Family AT5G38560 41.791 5.37e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr2g03558 Pkinase 4.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03558 - - gmx:100781529 610.912