Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03549 ATGGCCAAGCTCACCTCTCCTCACCATGGAGCCTTTCTCTGCTTCACCCTACTCTTCCCCCTCCTCGTCGCTGCTCAACCATCTTCCAATTCAAACAACGACCCAAACCAACAACAGCTCAATAGCCTCACCCCTTCCATGGCCATCATCATCGTCATCCTGATTGCCGCTCTTTTCTTCATGGGCATCTTCTCCATCTACATCCGCCACTGCGCCGACTCCCCCTCCGGCAGCGTCCGTCCCCTCGGCCTCCGTGCTCCCATAGGCCGTTCCCGGCGTGCTCCTCGCGGTCTCGACCCTCTCGTCATCCACACTTTCCCCACTCTTCACTATTCCGAGGTCAAGTCCCACAAGATCGGCAAAGGCGCCCTCGAGTGCGCCGTCTGCTTGTCCGAGTTCGAAGACTCCGAAACGCTGCGTTTGCTCCCCAAGTGCGATCACGTCTTCCACCCTGAGTGCATCGACGAGTGGTTGACTACTCATACCACCTGCCCCGTCTGCCGTGCCGACCTCGTTCCTCAGCCTGACCAGTCAGTCCGCGGACTTCCGATCCTCAACGCCGACGCCGTGGACCTTGAAGCTCAGAACGAGGTCGTGGAGCCCGAACCCGAGCAGCAGCATTCTGTGGAGGCCGATCCTGAACTGACGGAGTCAGAAGTTGTGTGCCTTAATCAGGCGGTGAAACGGAACCGCACAACGCGAGGGTCTCGATCGGGTTGGGCGCGGAGGTTTCCCCGGTCGCACTCGACCGGGCATTCCTTGGTCCAGCCGGGTGAAGACATGGAACGTTTCACTCTGAGATTGCCCGTGGATGTGAGGAATCAGATTTTGAACCGGGAGTTGCATCGGGCGACAAGCCTGGTTGTCTTGCCCAGAGAAGGTAGTTCGAGACGAGGATATCGAGTTAGTGGGGATGGCAGTAGCAGAGGAAGGCGCTCGAGGCGGCTGGATCGTGGTATTAAATCGGACCGATGGGTTTTCACGATGGCGCCGCCGTTCCTTGTGAGGGCATCGTCTATGAGGTCGCCGAAAGTGGGAGGGAGTGTCCGTGAAGGAACCTCCACTCAAATCGTCGTGCTGGCGGCAGCAGATGCGACCCGACCTCCGGTTTAA 1113 0.5885 MAKLTSPHHGAFLCFTLLFPLLVAAQPSSNSNNDPNQQQLNSLTPSMAIIIVILIAALFFMGIFSIYIRHCADSPSGSVRPLGLRAPIGRSRRAPRGLDPLVIHTFPTLHYSEVKSHKIGKGALECAVCLSEFEDSETLRLLPKCDHVFHPECIDEWLTTHTTCPVCRADLVPQPDQSVRGLPILNADAVDLEAQNEVVEPEPEQQHSVEADPELTESEVVCLNQAVKRNRTTRGSRSGWARRFPRSHSTGHSLVQPGEDMERFTLRLPVDVRNQILNRELHRATSLVVLPREGSSRRGYRVSGDGSSRGRRSRRLDRGIKSDRWVFTMAPPFLVRASSMRSPKVGGSVREGTSTQIVVLAAADATRPPV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03549 370 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 173 IPR013083 -
Accr2g03549 370 SMART ring_2 126 167 IPR001841 -
Accr2g03549 370 MobiDBLite consensus disorder prediction 293 315 - -
Accr2g03549 370 SUPERFAMILY RING/U-box 125 175 - -
Accr2g03549 370 CDD RING-H2_EL5-like 125 168 - -
Accr2g03549 370 FunFam E3 ubiquitin-protein ligase ATL6 88 174 - -
Accr2g03549 370 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Accr2g03549 370 Pfam Ring finger domain 125 168 IPR001841 -
Accr2g03549 370 MobiDBLite consensus disorder prediction 234 256 - -
Accr2g03549 370 PANTHER RING FINGER DOMAIN-CONTAINING 29 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03549 Accr-Chr2 70957275 70958387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03549 4 350 Rapid Response to Elicitors AT3G05200 48.596 9.06e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03549 K10664 - gmx:100810865 419.083