Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03541 ATGGGGTTTGGTGGCAGTGGAGCTCAGTTTTCTTGTAGTTCTTATCCTTACCAACCAAGGCAAACATCTGATAGCGCAAACACATCTATGTCTGTTGGTGGCATTGGAGCTCAGCCAAGCCAAATATCTGATAGCGCTAACACATCTATGAGTGTTGGTGGCATTGAAGCTCAGCCAAGCCAAATATCCGATAGCGCAAACACATCTATGGGTGTTGGTGGCATTGGAGCTCAGCTGCAATATGGTTCTAACCCTTACCAGCCAAGGCAAATATCTGATAGCGCAAACACATCTATAGGGGTTGGCGGCAGTGGAGCTCAGTTGCATTATGGTTCTAACCCTTACCAGCCAAGGCAAATATCTGATAGCACAAACCCATCTATGGGTGTTGGTCGCAGAGGAGCTCATTCGCCTCATGGTTCTAATCCTTACCAGCCAAGGCAAACATCTTATAGCGCAAACCCATCTATCGGTGTTGGTCGCAGACCTCATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTGATAGCACAAACCCATCTATCGGTGTTGGTCGCAGAGGAGGTCATTCGCCTCATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTTATAGCGCCAACCCATCTATGGGGATTGATGGCAGTGAAGCTCAGTTGCCTTATGGTTCTAATCCTTACCAGCCAAGGCAAATATCTTATAGCGCAAACCCATCAATGGGGGTTGGTGGCACTGAAGCTCAGTTGCCATCTGTTTCTAATCGAAATTACCAGCCAAGACAAATATCTTATAGCGCAAACCCATCAATGGGGGTTGGTGGCACTGAAGCTCATTCTAATCGTAATTACCAGCCAAGCCAAATATCTTATAGCGCAAACCCATCAATGGGGGTTGGTGGCACTGAAGCTCAGTTGCCTAATGTTTCTAATCCTAATTACCAGCCAAGGCAAATATCTTATAGCGCAAACCCATCAATGGGGGTTGGTGGCACTGAAGCTCAGTTGCCGTCTGTTTCTAATCGTAATTACCAGCCAAGACAAATATCTTATAGCGCAAACCCATCAATGGAGGTTGGTGGCACTGAAGCTCATTCTAATCGTAATTACCAGCCAAGCCAAATATCTTATAGCGCAAACCCATCAATGGGGGTTGGTGGCACTGAAGCTCAGTTGCCTTATGGTTCGAATCCTAATTACCAGCCAAGCCAAATATCTTATAGCGCAAACCCATCTATGGGGGTTTGTGGCAGTGAAGCTCCGTTGCCTTATTATTTTAATCCTTACCAGCCAAGCCAAATATCTGGGGCATCTGGTTCTGTCGTTACATCTTCAGGGGCCATTCAAACCACTAGCCAGCTTGCAGGAGGTAATCAGCAACAGTTGCAGCAGCAACTCAAAACCTTTGGGAAAAATCAATACCAAGAAATTGACAGGGTAACTGATTCCAAGAACCTGGAGTGTGGGATCAGGAAGCTTATGGCCGATAAAAATGTCAAGGCAATATCAGATGAGGCACCTGCTATACTTGCAACGGCGTGTGAAATGTTCATATCAGATTTGACCCTGCGTTCTTGGAACCACACTGAGAAAAAGAAAAGGAAAAGCAAAACAGTGCAGAAAGATGATATCGCAGCAGCAATCACAGAGACTGACTTTTTGGTTGATAGTGACCCCCAGGAGGACTTGAAAGATGAACTACTTGCATCAATCCGTAGAGGAACCATGCCAGTTGCAGGTCCTGTTGATGATTTTCCTTTTAGGTCTATTTCAGCACAGCATGCTACTCAAGTTGGCGCTACCGGCATCATGGATTCAGATGCATCAATCCCTAGAGGAACCATGCCAGGTGCAGATCCTGATGATGATCTTCCTTTTACGTATCTTTCAAATTCACCACAGTATGCTCCTCAAGCTGGCGCTACCGGGGCCATCATGGCCATGGGTAGGCCTGTAATGGACCCGAACCTATATCCTCAACAGCCGCATCCCTACATGTCACAACAAATGTGGCCACACCAACAAGAGCACCAACGACCATTTCCAGATCGTTAG 2052 0.4635 MGFGGSGAQFSCSSYPYQPRQTSDSANTSMSVGGIGAQPSQISDSANTSMSVGGIEAQPSQISDSANTSMGVGGIGAQLQYGSNPYQPRQISDSANTSIGVGGSGAQLHYGSNPYQPRQISDSTNPSMGVGRRGAHSPHGSNPYQPRQTSYSANPSIGVGRRPHGSNPYQPRQISDSTNPSIGVGRRGGHSPHGSNPYQPRQISYSANPSMGIDGSEAQLPYGSNPYQPRQISYSANPSMGVGGTEAQLPSVSNRNYQPRQISYSANPSMGVGGTEAHSNRNYQPSQISYSANPSMGVGGTEAQLPNVSNPNYQPRQISYSANPSMGVGGTEAQLPSVSNRNYQPRQISYSANPSMEVGGTEAHSNRNYQPSQISYSANPSMGVGGTEAQLPYGSNPNYQPSQISYSANPSMGVCGSEAPLPYYFNPYQPSQISGASGSVVTSSGAIQTTSQLAGGNQQQLQQQLKTFGKNQYQEIDRVTDSKNLECGIRKLMADKNVKAISDEAPAILATACEMFISDLTLRSWNHTEKKKRKSKTVQKDDIAAAITETDFLVDSDPQEDLKDELLASIRRGTMPVAGPVDDFPFRSISAQHATQVGATGIMDSDASIPRGTMPGADPDDDLPFTYLSNSPQYAPQAGATGAIMAMGRPVMDPNLYPQQPHPYMSQQMWPHQQEHQRPFPDR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03541 683 SUPERFAMILY Histone-fold 472 552 IPR009072 GO:0046982
Accr2g03541 683 MobiDBLite consensus disorder prediction 660 674 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 1 53 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 7 53 - -
Accr2g03541 683 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 489 547 IPR003958 -
Accr2g03541 683 MobiDBLite consensus disorder prediction 168 184 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 195 213 - -
Accr2g03541 683 Gene3D Histone, subunit A 449 558 IPR009072 GO:0046982
Accr2g03541 683 MobiDBLite consensus disorder prediction 654 683 - -
Accr2g03541 683 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 448 574 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 81 226 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 81 130 - -
Accr2g03541 683 MobiDBLite consensus disorder prediction 141 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03541 Accr-Chr2 70899377 70901788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03541 468 579 CCAAT-HAP5 Transcription Factor Family AT1G08970 57.143 3.94e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr2g03541 CBFD_NFYB_HMF 6.6e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03541 K08066 - gmx:100527803 239.195