Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03523 ATGGCAGACTCGCAGGGTGATTCAAAAATGTTCAGCGTTCGGATTGTGTCCATCGAATACTACATGGCACCGCCGATTCCAGGCATGGATATCTGTTACAGCAGTTTCCATGGTGGGAAGGTGAATGAGGTTCCAGTTGTAAGAATATATGGTTCTACTCCAGCAGGGCAGAAAACTTGTTTGCATATACATCGGGCCTTGCCCTACATTTATGTGCCATGTGCTGATATACCCCTTCAGTCAGATCAAGGAGCAGATGTGTACACATATAAGGTATCTGCATCTCTTGAGAAGGCATTGGAGCTAAAAGGCAGCAGTGGTTTGACGAGACAACATGTACATGGCTGCAGTCTTGTAAGAGCAAGGAGATTTTATGGCTATCATTCATCAGAGGAGTTATTTGTGAAGATATACCTATATTATCCGCAAGATGTCTCCCGTGCCGCTAATCTACTACTGGATGGTGCTGTTCTTGGCAAAAGCTTACAGCCCCATGAATCACATATTCCCTTCATTCTTCAGTTTCTGGTTGATTATAACTTGTATGGCATGGGTCAACTGCACTTGTTAAAGATGAAGTTTCGCCATCCTATGCCAGATTCTTCTCACCAAAAATTGATTTTCAATGGTCAACAGACGGGGTCAGCAGTGTGGACATCATCAATGGTCTCATCTGATTGGATGTGGCAACTTCCTTGTGAATTGGATGCTTCATCAAATCATGAGGCTTATTGCCCAAAACGTCAAAGCACATGTGAACTGGAGGGCGATGCTTCTGTAGATGATATTCTTAATCAGCAGTTCAAAATGTATTCATCCCTCTCACAAACTCGATCAGATGTGCAAATGGTTCAGTCTCTTGTACCAATCTGGAAGGAGCAGCAAGAAAGGACTGGGATTTATGAGGATTCTGTACCTCCTGATCCAGGGAAGCCGCTGCCGGAAGTTGTTATGAGAAGTCTATCTGCTGGTCTGGACTTTGAGAAAAAGTTTGTTGAACTGTGCTGTGGAGCTGAAACCTGTGCATCCTTTACTTCCTTTGAGGAGCTGAGAGAAACGGACATAATAGGTTCAGCATCACCACCGGCTTCAATGTGCAAAGATTCCAAATTGCATGAAGAAGGGACAGAGGCAGATCTCAGATTGTTGACTGTTGATGAAACGCAACCATCTGAGATTATTGGAACACAGGGCATAAAGGCGGCAAGTAAGGAAGCATTGAATCTCCTAAAGTGGCTTGCAACTTCTCAAGCTGCAGAGGATATCAACTCAGATGATGAACTTATTCGTGAAACCATTTTGAGTCCTTTATTACCTGCTACAACAATTGATCAGGTGCTGGAGAAAGCTAATATAGATTACGAGAGTGAGTCCCAAAAGGAGTGTCAAGATATTCTTGATTCCATTGATGATCAATGTCAGTTGGAGTCATCAAAGAGAACTCCACCTTTTTCCACAAATTTTGATCATCCTGTTGAGTCTTCAAACAATTTGATTCCTCAAGTTGATGGTTCTGCTGATGATGAGTTTCCAAGTCCAAGTGCCAATTCAGCTGGAATTTCATTTTCACTGGACCAAAAGGGTGAATCCGAAAGGTCTTCCAAGTACCGTATACTGCAAAATATCAGAGCCAATACTCATAGCAAAGGTAACAGGAACAAAGTATGGGGCTCTTTGCCATTTGCAATGTCCCGTAACAGTTTTGAACATGCTAGCTTACATGTTCCTCATACATCTGTAAGGGAAACTGGAGAATCTGCTGACTCGGTTTATATGGCCAGAAATGAGACACAGAATAATGGCATAAATAATGGGGGTCAAGGTGCTTCAGACTTAAAGGAAGTACATGCGCTGGATAATTGCTCTGTGCGGGACTTGATGAGAAGAAAGAGATGTTATCGAGTTGAGCAAACTGACCATGAATCTGAAATAACTAAAAAACTACTTTTTGATGGGGATGAGAAGCTGGAAACTGATGAAGGAGAAACAGAAGTCCAGAAGAGCTGTGTTCTGAAAATGAGCAATCGTGATTTTGTGTGTAGGAAATCACCCCATGTAGTTGGCAGTTGTACTGGACCGACTTTCTCTGAGCTGAAGAAGTTTCATTCTACTAGTTCTTTTGATCACTTAGCGGTTTCCAGTGGTGAAAAGTTTAAGGTTGACTCAACATGTGTACAAACTGACAAGTGTCAACAAATTGATATTGCAGCCTTAGGTAGTGTACAAAGCTCTTCTATTGAGAATTTAGGATCTGGAAGAGATAATTTGTATAAATGTTCTCATGGAAGCAAATCTTATGAGCAACATGGTCAGACGGACTCATGTGAGAATGCTGTAAGTGTGAATGCTGCAACTGGCATTCAAGTATTGCAATGTACAAAAAGTGATGAGGAAAAACCTAGAGAGAATTTGGGTTTTTGTGAGACTATTGGCATGGAACCCTTTGTCAATGACATGATGGGTAATCACATGAGATTAACCTCTGGCAGGACAGATGCCTTGGCAGTGAAAATTCTGGATGATGTTACTCCTGCTTCTGCTGGTGGTTCCCAGAATGAGATGAAAACTTGGAACAAGCATATTTCCAATAATGCCCGTGGTCCTGAAGGGGAAAAGGTCTTGGGTGTTGCAACTTATTACCAAAATGATGGCTCTCATCTATGTGTATTGAAACCCAAAATTTTGCCTCCTTCTGCGGGTAGTGTTCAGAGATGGCTACTTTGTGATGAGAGAGTTAAAATGTTTCAAGAAATCGATGCAAAGGAGACACATTTGCCTAAATGGAATACAAGACCTTGTCTTATGTCTAAACATTTCCATGATGTTGATTCTGAAAAGAAGACCCCATGCATTAGTGGCGGACAAATGAATCTAATCAAAACATGCATGGATGGCTCACAAGATGCTCCTCAAATATCAGGCCCTGATGTGAAATCAAGGTCTACTCCTCTAAGTCAAATCGGATTTCGTGATCCTGCAAGTACTGGCTGTGGACAGCAATTGACATTACTCAGTATAGAGGTTCTCGCAGAATCAAGAGGAGAACTTTTACCTGATCCCCGGTTTGATGCTGTCAATGTTGTAGCTCTTGGTTTTCAAAATGATAGTGACACTATTGTTGATGTTCTTGTCCTTTTGCATTGTAAACCAGAACCTTGTCAAAGAAATTTTGGAGGTCTATCAGGCTGCAAGGTGTTGATCTTCACGGAGGAACAGTACTTGCTAAAAAAATTTATTAAGATTGTGTCTTCATCTGATCCAGATATTCTGATGGGCTGGGATATTCAAGGCGGTTCTCTTGGATTTTTAGCAGAAAGGGCTTCACATCTTGGATTAGGATTACTTAATAGTTTATCTCGTACTCCATCTGACGTTTGGATTACTTCTGATGATGCTGAAACTTCTGAAAAAGATATGTCAGAAACTGCCATTCCTGATATATCTAGTGCAGATGATGTACAAGAAAGGTCAATAATTGAGGATGAATGGGGACGTACGCATGCCAGTGGAGTTCATGTTGGTGGCAGAATTGTTCTTAATGTGTGGCGACTTATCCGTGGAGAAGTTAAGCTCAATTTATACTCAGTTGAAGCTGTAGCTGAAGCTGTATTGAGGAGGAAAGTTCCTTCAATTCACAACAAGGTTCTGACTAAATGGTTTTCTGGTGGTCCTGGACGAGCAAGATATCGGTGTGTTGAATATGTTACCGAGAGAGCAAAGCTGAATCTTCAGATATTAAGCCAACTTGATATGGTAAATCGAACATCGGAACTTGCTCGCATTTTTGGTATAGATTTTTTTTCTGTTCTCTCCAGAGGTTCCCAATACCGTGTTGAATCAATGTTTTTGAGGTTGGCACATACACAAAACTATCTTGCCATCTCTCCTGGGAATCAACAGGTTGCTTCTCAACCTGCCATGGAGTGCCTACCCCTTGTGATGGAACCAGAGTCAGGATTTTATTCAGACCCAGTTATTGTATTTGACTTTCAGTCATTATATCCATCCATGATAATTGCATACAACCTTTGCTTTTGTACATGCCTTGGCAAAGTTGTGGCATCAAAAGCAAACACGTTCGGGGTGAGTTCATTTTCACCAGAGCAGCGTGTTCTGCAGGATTTAAAAGATCAGATCTTGCTTACTCCAAATGGTGTTATGTTTGTTCCTTCCAAGGTTCGTCGAGGTATACTACCACGCTTGTTGGAAGAAATTTTATCAACCAGGATAATGGTAAAACAAGCAATGAAAAAGTTGGCTGCTTCACAGCAAGTCCTTCAGCGGATATTTAACGCAAGACAGCTTGCTTTGAAGCTTATATCAAATGTGACATATGGCTACACTGCTGCTGGATTTAGTGGTCGTATGCCTTGCGCAGAGCTTGCAGACAGTATTGTTCAGTGCGGCCGTTGCACGCTGGAAAGGGCAATATCATTTGTAAATCAACACGATGAGTGGAATGCAAGAGTCATTTACGGAGATACTGATAGCATGTTTGTTCTCCTCAAAGGACGCACCATTAAAGAATGTTTCCAAATTGGGAGTGAGATTGCTTCTGCTGTCACTGCTATGAACCCAAGTCCTGTCACCCTGAAGTTGGAGAAAGTTTACCAGCCTTGTTTCCTCCTTACTAAGAAGCGAGACACATGTGGTGCAGTTGCAAAGATAATGGAACGGTCTTTGAGGCTCTTTTTTGAAAATCAGGATTTGTCGGAGGTGAAAAGTTATTTACAACGTCAGTGGAACAGAATTCTTTCAGGCAAAGTCTCCGTTAAAGATTTTGTCTTTGCTAAGGAGGTTCGCCTTGGTAGCTATAGTGCCAGGACATCATCATCTTTACCTCCAGCTGCAATTGTTGCCACCAAGGCAATGAGGTTTGACCCTAGGGCAGAACCACGTTATGCTGAGAGAGTACCGTATGTTGTAATCCATGGAGAGCCTGGAGCCCGCCTGGTTGACATGGTTGTGGATCCATTGGAAGTTTTGGCACTTGATTCCCCATTCAGAATAAATGACTTGTATTACATTAATAAACAAATAATACCTGCTTTGCAGCGGGTGTTTGGGCTTGTTGGTGCTAACCTGAACCAATGGTTCTTAGAGATGCCCCGTCCTTTAAAGGAAGCCCATGTAAAGCATCTCATTGCACCAAATTCACATCGAATGAGAATTGACTCGTATTATCTGTCAAAGCATTGTATACTGTGTGGTGGATTGGTTCAAGCATCTGCGCTTATATGCATTCAGTGTTCTGAAAATGGAGTGGCTGCTGCAACGGCTGTGATTTCTAAAACATCAAAGTTGGAACAAGAGATGCAGCATCTTTTTGCTATATGTGATCATTGTGGAGGTGGAGACAGGCTTCTGGAAAGTGATGTAAAGTGCACATCAATTTCATGCTCGGTGTTTTATGAGAGACGAAAAGTTCAGAAGGAACTACTAGCTATGAACCATGTTGCTGCTGGTGAAGGCTTCTATCCAAAATGCATGGTCGAGTGGTTCTGA 5505 0.4198 MADSQGDSKMFSVRIVSIEYYMAPPIPGMDICYSSFHGGKVNEVPVVRIYGSTPAGQKTCLHIHRALPYIYVPCADIPLQSDQGADVYTYKVSASLEKALELKGSSGLTRQHVHGCSLVRARRFYGYHSSEELFVKIYLYYPQDVSRAANLLLDGAVLGKSLQPHESHIPFILQFLVDYNLYGMGQLHLLKMKFRHPMPDSSHQKLIFNGQQTGSAVWTSSMVSSDWMWQLPCELDASSNHEAYCPKRQSTCELEGDASVDDILNQQFKMYSSLSQTRSDVQMVQSLVPIWKEQQERTGIYEDSVPPDPGKPLPEVVMRSLSAGLDFEKKFVELCCGAETCASFTSFEELRETDIIGSASPPASMCKDSKLHEEGTEADLRLLTVDETQPSEIIGTQGIKAASKEALNLLKWLATSQAAEDINSDDELIRETILSPLLPATTIDQVLEKANIDYESESQKECQDILDSIDDQCQLESSKRTPPFSTNFDHPVESSNNLIPQVDGSADDEFPSPSANSAGISFSLDQKGESERSSKYRILQNIRANTHSKGNRNKVWGSLPFAMSRNSFEHASLHVPHTSVRETGESADSVYMARNETQNNGINNGGQGASDLKEVHALDNCSVRDLMRRKRCYRVEQTDHESEITKKLLFDGDEKLETDEGETEVQKSCVLKMSNRDFVCRKSPHVVGSCTGPTFSELKKFHSTSSFDHLAVSSGEKFKVDSTCVQTDKCQQIDIAALGSVQSSSIENLGSGRDNLYKCSHGSKSYEQHGQTDSCENAVSVNAATGIQVLQCTKSDEEKPRENLGFCETIGMEPFVNDMMGNHMRLTSGRTDALAVKILDDVTPASAGGSQNEMKTWNKHISNNARGPEGEKVLGVATYYQNDGSHLCVLKPKILPPSAGSVQRWLLCDERVKMFQEIDAKETHLPKWNTRPCLMSKHFHDVDSEKKTPCISGGQMNLIKTCMDGSQDAPQISGPDVKSRSTPLSQIGFRDPASTGCGQQLTLLSIEVLAESRGELLPDPRFDAVNVVALGFQNDSDTIVDVLVLLHCKPEPCQRNFGGLSGCKVLIFTEEQYLLKKFIKIVSSSDPDILMGWDIQGGSLGFLAERASHLGLGLLNSLSRTPSDVWITSDDAETSEKDMSETAIPDISSADDVQERSIIEDEWGRTHASGVHVGGRIVLNVWRLIRGEVKLNLYSVEAVAEAVLRRKVPSIHNKVLTKWFSGGPGRARYRCVEYVTERAKLNLQILSQLDMVNRTSELARIFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYSDPVIVFDFQSLYPSMIIAYNLCFCTCLGKVVASKANTFGVSSFSPEQRVLQDLKDQILLTPNGVMFVPSKVRRGILPRLLEEILSTRIMVKQAMKKLAASQQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLERAISFVNQHDEWNARVIYGDTDSMFVLLKGRTIKECFQIGSEIASAVTAMNPSPVTLKLEKVYQPCFLLTKKRDTCGAVAKIMERSLRLFFENQDLSEVKSYLQRQWNRILSGKVSVKDFVFAKEVRLGSYSARTSSSLPPAAIVATKAMRFDPRAEPRYAERVPYVVIHGEPGARLVDMVVDPLEVLALDSPFRINDLYYINKQIIPALQRVFGLVGANLNQWFLEMPRPLKEAHVKHLIAPNSHRMRIDSYYLSKHCILCGGLVQASALICIQCSENGVAAATAVISKTSKLEQEMQHLFAICDHCGGGDRLLESDVKCTSISCSVFYERRKVQKELLAMNHVAAGEGFYPKCMVEWF 1834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03523 1834 SUPERFAMILY Ribonuclease H-like 36 1272 IPR012337 -
Accr2g03523 1834 FunFam DNA polymerase 1542 1710 - -
Accr2g03523 1834 SUPERFAMILY DNA/RNA polymerases 1273 1704 IPR043502 -
Accr2g03523 1834 ProSitePatterns DNA polymerase family B signature. 1492 1500 IPR017964 GO:0000166|GO:0003676
Accr2g03523 1834 Gene3D - 1032 1308 IPR036397 GO:0003676
Accr2g03523 1834 PRINTS DNA-directed DNA-polymerase family B signature 1434 1446 IPR006172 GO:0000166|GO:0003676|GO:0003887
Accr2g03523 1834 PRINTS DNA-directed DNA-polymerase family B signature 1325 1338 IPR006172 GO:0000166|GO:0003676|GO:0003887
Accr2g03523 1834 PRINTS DNA-directed DNA-polymerase family B signature 1490 1498 IPR006172 GO:0000166|GO:0003676|GO:0003887
Accr2g03523 1834 SMART polmehr3 999 1504 IPR006172 GO:0000166|GO:0003676|GO:0003887
Accr2g03523 1834 Pfam C4-type zinc-finger of DNA polymerase delta 1733 1806 IPR025687 -
Accr2g03523 1834 CDD DNA_polB_zeta_exo 998 1247 - -
Accr2g03523 1834 FunFam DNA polymerase zeta 1392 1451 - -
Accr2g03523 1834 Gene3D DNA Polymerase, chain B, domain 1 29 197 - -
Accr2g03523 1834 MobiDBLite consensus disorder prediction 510 526 - -
Accr2g03523 1834 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 1546 1826 IPR030559 GO:0006281|GO:0016035|GO:0019985
Accr2g03523 1834 Gene3D - 1547 1705 IPR042087 -
Accr2g03523 1834 Pfam DNA polymerase family B, exonuclease domain 1000 1144 IPR006133 -
Accr2g03523 1834 Gene3D Helix hairpin bin 1391 1451 - -
Accr2g03523 1834 FunFam DNA polymerase 1008 1308 - -
Accr2g03523 1834 FunFam DNA polymerase 30 196 - -
Accr2g03523 1834 Gene3D Palm domain of DNA polymerase 1311 1546 IPR023211 -
Accr2g03523 1834 CDD POLBc_zeta 1273 1696 - -
Accr2g03523 1834 Pfam DNA polymerase family B 1266 1547 IPR006134 GO:0000166|GO:0003677
Accr2g03523 1834 MobiDBLite consensus disorder prediction 505 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03523 Accr-Chr2 70704477 70719810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03523 39 209 Core DNA Replication Machinery Family AT5G63960 25.424 6.51e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03523 K02350 - gmx:100777934 2432.91