Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03516 ATGTCGAACAACACAAGCGGCGACAGTGTAAGCTTCTCGACAGAGAACGCCGGAGAAGGTGGCGCCAAACGGCCATCTGAGGTCCTTGGTCAGTTTAACAGTCCAAATTCTCTCACTTCCACGACGACAACTAACAGCAATGGTTCCAATACACCTCCACCTCCACCTCCTAAGAAAAAGAGAAACCTACCAGGAAATCCAGATCCAAGCGCTGAGGTGATAGCTCTATCACCAAACACCCTAATGGCCACAAACCGATTCATCTGTGAGATTTGCAACAAAGGGTTTCAGAGGGATCAGAACCTGCAATTGCACCGTCGAGGCCATAACCTGCCTTGGAAGCTCAAGCAAAGAAGCACCATAGAAGTTCGAAAGAAGGTGTACGTTTGTCCTGAACCATCTTGCGTCCACCACAACCCAGCCCGAGCACTTGGTGATCTCACTGGTATTAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGTGACAAATGCTCCAAGAAATACGCTGTTCAATCTGACTGGAAAGCCCACTCTAAGATCTGTGGAACCAGGGAATACAAATGTGACTGTGGCACCGTCTTTTCCAGGAGAGATAGCTTCATCACGCATAGAGCTTTCTGCGACGCACTGGCTGAGGAGAACAACAAAGCCAATGAAAGACAAACAATGCAAGGAATGAGCCCGGGCTTTAGGCCAGGGAATCAAATTCAGAACCTAGTTTCTTCATTACCAGTCAATAATACCAATAATATCGTCCCGAACTCACAAGTTGGGAATATGGATAACAATGATAACAAGCATCCAATGTCGTCGCTGCTTCAGGAGCTCATGCCAATGCCTGCAAATAAACCCTTTAACCATAATATGAATAATGCAGGAAATCTATTCACGAGAAGCCTCTCTTCTAATTCCTCAGCACCTCCTCTTCAACTAAATTCGAACTCACCCAACGTTTTCGAAGAAAATGGGCATCAACTACCGCTACCGGCGGCGGCCGCAGCTTCCTCACAGCTCATGTCTGCGACGGCACTGCTCCAGAAAGCCGCACAAATGGGTGCAACTGTGAGCAACTCGTCGTCCATGGCGCCGCCGTCATATGGTTCAAACGGGCTTTCCTTCATGAACCACTACATGCAGAACGGGCAAGAGGATCATATCTCCGGTGGTGGTCAGTATTTAAATGCGAACGGGGGCATGGGAATGAACGGTGTGGATATGTTTAACGCTATCTTGGACCAAAGCAAGGCATTCTCGAGGATGATAGAGGAGAATAATCGAGGTAATAATAATGGAGTTTTGCATAGTGGGGCAAGTGGTGGGGCTATTAACATTGGTGGAGCTAAGGGAAGTGGGGATGTGCTGACTCTGGACTTTATGGGAATTGGAGGAGGAGGAGGAGGTTCACATGCAAGTTTCTACGGAAACCAACACCAACAGGGAGAAAAAGGTGCCGTTAGAGGAGATGACATCTGGAGAAATTGGTCTATCAAGAATGCAGGATTTGAATCATTCTCAGCAGCAGGCAGCATCAACTGA 1548 0.478 MSNNTSGDSVSFSTENAGEGGAKRPSEVLGQFNSPNSLTSTTTTNSNGSNTPPPPPPKKKRNLPGNPDPSAEVIALSPNTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSTIEVRKKVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTVFSRRDSFITHRAFCDALAEENNKANERQTMQGMSPGFRPGNQIQNLVSSLPVNNTNNIVPNSQVGNMDNNDNKHPMSSLLQELMPMPANKPFNHNMNNAGNLFTRSLSSNSSAPPLQLNSNSPNVFEENGHQLPLPAAAAASSQLMSATALLQKAAQMGATVSNSSSMAPPSYGSNGLSFMNHYMQNGQEDHISGGGQYLNANGGMGMNGVDMFNAILDQSKAFSRMIEENNRGNNNGVLHSGASGGAINIGGAKGSGDVLTLDFMGIGGGGGGSHASFYGNQHQQGEKGAVRGDDIWRNWSIKNAGFESFSAAGSIN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03516 515 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 109 IPR013087 -
Accr2g03516 515 MobiDBLite consensus disorder prediction 49 63 - -
Accr2g03516 515 MobiDBLite consensus disorder prediction 29 48 - -
Accr2g03516 515 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 42 478 IPR031140 -
Accr2g03516 515 Gene3D Classic Zinc Finger 141 222 - -
Accr2g03516 515 SUPERFAMILY beta-beta-alpha zinc fingers 86 183 IPR036236 -
Accr2g03516 515 Gene3D Classic Zinc Finger 66 132 - -
Accr2g03516 515 Pfam Zinc-finger double-stranded RNA-binding 87 109 IPR022755 -
Accr2g03516 515 FunFam protein indeterminate-domain 5, chloroplastic-like 141 220 - -
Accr2g03516 515 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Accr2g03516 515 MobiDBLite consensus disorder prediction 1 16 - -
Accr2g03516 515 SMART c2h2final6 128 158 IPR013087 -
Accr2g03516 515 SMART c2h2final6 87 109 IPR013087 -
Accr2g03516 515 SMART c2h2final6 163 183 IPR013087 -
Accr2g03516 515 FunFam protein indeterminate-domain 12-like 66 134 - -
Accr2g03516 515 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03516 Accr-Chr2 70660443 70662964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03516 40 365 IDZ Gene Family AT3G50700 53.959 2.44e-118 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g03516 zf-C2H2_jaz 7.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03516 - - gmx:100813556 603.979