Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03479 ATGGCAAATCGAGAAGCTTCACAGAGAAGGAGGAGACTAGCCATCATCGGCGTGTCCAGTTTCTTGCTGGTGGCCATGGCGGTGGCCGTCACGCTAGGTGTCAGCATGAACCAAAGCAATTCTGAATCAAGCCAGCCAAAAGACAACAACAAGTCCCATGTCTCAGATTCAATGAAAGCCGTAACAGACCTCTGTCGTCCCACCGATTACAAAAAGGAGTGCGAGAACAGTATCAAGTCGGAGGCCGGCAACACCACCACCGACCCTAAAGATCTCATCAAGATCGCCTTCAACATCACCATTCGCTCCGTCGGTGAGTCTCTCCAGAAAACCCGTCTCATCCATGAGATCGAGAAAGAACCCAGATCCAAGATGGCACTCGATTCCTGCATGCACCTCATGGCCCTCTCCATCGGCGAGTTCCGAAAATCCGTCCAAAACATGGGCTCTTTTGATCTCACCGACGTCGACGACATGCTCATGAACCTCAAGGTTTGGATCAGCGGCGCCATCACCTACCAACAGACCTGTTTGGATGGATTTCAAAACACCACCAGCCCTGCCGGTAAACAGATGCAGGATGTATTGAAACTCACCATGAAACACAGCAGCAACATTCTCGCCATCATCAATGACTTAGCTAACAGTCTCGCCCAGTTGAACATCTCAAGCTCAGCTACCTCACGTCATCTCCTTCAGGATGTTTTCGACTTTCCCATCTGGGCTCAATCTGGTTTGAGAAGACTTCTCGCCACCGGCAAGCTCAGGCCCAATGTGGTTGTAGCCAAGGATGGGACTGGAAAAGTCAGGACCATTAACCAAGCCTTGAAAATGGTCCCCATAAGTAACGTGAAGCCTTTCGTCATCTACATTAAAGAAGGAGTCTACCATGAGTACGTTCACGTCATGACCAACATGACCCGCGTCGTCATGATCGGCGATGGAGCTCACAAGACCCGAATCAACGGCAACAGAAACTTTGTCGACGGCATTGGCACCTTCAGGACCGCCACCGTTGCCGTTGACGGAGATTTCTTTGTTGCGATGAAGATTGGGTTTGAGAACTCGGCTGGACCCGAGAAGCATCAAGCTGTAGCCCTGAGAGTGCAAGGTGACATGGCAGTGTTGTACAAATGCGCCATGGATGGGTACCAGGACACACTCTACGCGCACGCGATGCGTCAATTCTATAGGGACTGTACCATTTCCGGTACGGTGGACTTCGTCTTCGGCGATGCCGTGTCGGTGTTCCAGAACTGCACATTTGTGGTGAGGAAGCCACTGGAGGAACAGCAATGCATCGTGACGGCGCAGGGAAGGAAGGAAAGGCACCAGCCGACGGGAATAGTGATCCAGGGAGGGTCCATCGTAGCAGATTCCAAGTTCTACTCAGATAGGTTAAAGAACAAGGTTTACTTGGCACGGCCATGGAAGATATACTCGAGAACCCTATTCATGGAGACATTCATGGATGACTTGATCGACGGTGATGGGTTTTTGCCGTGGGAAGGCACACTGGGGCTGGAGACGTGCTATTATGCAGAGTACAATAATAGCGGCCCTGGTTCTGATAAATCCAAACGTGTTAAATGGGGTGGCATCAAGAACATCACTCCCCAACAGGCAAACACTTGGACGCCTCTCAACTTCTTCAAGGGGGACAAGTGGATTAAGATTACTCGCATTCCTTACACACCTTCCTCTTGGACCTTCTAA 1716 0.5076 MANREASQRRRRLAIIGVSSFLLVAMAVAVTLGVSMNQSNSESSQPKDNNKSHVSDSMKAVTDLCRPTDYKKECENSIKSEAGNTTTDPKDLIKIAFNITIRSVGESLQKTRLIHEIEKEPRSKMALDSCMHLMALSIGEFRKSVQNMGSFDLTDVDDMLMNLKVWISGAITYQQTCLDGFQNTTSPAGKQMQDVLKLTMKHSSNILAIINDLANSLAQLNISSSATSRHLLQDVFDFPIWAQSGLRRLLATGKLRPNVVVAKDGTGKVRTINQALKMVPISNVKPFVIYIKEGVYHEYVHVMTNMTRVVMIGDGAHKTRINGNRNFVDGIGTFRTATVAVDGDFFVAMKIGFENSAGPEKHQAVALRVQGDMAVLYKCAMDGYQDTLYAHAMRQFYRDCTISGTVDFVFGDAVSVFQNCTFVVRKPLEEQQCIVTAQGRKERHQPTGIVIQGGSIVADSKFYSDRLKNKVYLARPWKIYSRTLFMETFMDDLIDGDGFLPWEGTLGLETCYYAEYNNSGPGSDKSKRVKWGGIKNITPQQANTWTPLNFFKGDKWIKITRIPYTPSSWTF 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03479 571 FunFam Pectinesterase 252 568 - -
Accr2g03479 571 FunFam Pectinesterase 57 214 - -
Accr2g03479 571 Pfam Plant invertase/pectin methylesterase inhibitor 60 209 IPR006501 GO:0004857
Accr2g03479 571 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Accr2g03479 571 PANTHER PECTINESTERASE 18 558 - -
Accr2g03479 571 CDD PMEI-like_3 64 215 - -
Accr2g03479 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 213 IPR035513 -
Accr2g03479 571 Pfam Pectinesterase 258 554 IPR000070 GO:0030599|GO:0042545
Accr2g03479 571 MobiDBLite consensus disorder prediction 38 57 - -
Accr2g03479 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 215 IPR035513 -
Accr2g03479 571 SMART PMEI_2 56 209 IPR006501 GO:0004857
Accr2g03479 571 Gene3D - 252 567 IPR012334 -
Accr2g03479 571 SUPERFAMILY Pectin lyase-like 256 565 IPR011050 -
Accr2g03479 571 NCBIfam pectinesterase inhibitor domain 30 213 IPR006501 GO:0004857
Accr2g03479 571 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03479 Accr-Chr2 70336085 70338103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03479 5 565 Carbohydrate Esterase AT3G05610 46.195 0.0 560