Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03458 ATGGATCTCCTGCAGAAGGAAACGTTTCATGAGGAATTGATTGATAACAAGAAGTGTTGCACTGATTGCAAGACTACTAAGACCCCACTCTGGAGAGGGGGACCTTCTGGGCCCAAGACTCTGTGCAACGCTTGCGGGATAAGATACAGGAAGAAAAGGGTTTCACAGGTGGGATTGAGATTGAACAGAGGACAAGAGAGGAAGAGAGACAAAAAACACAGTCGGAATGGCGGTAGAGCTGTTGGTAATGACGGAGACGATTTGGAGAAGCGTTTGAAGATGAATTTGGTGGCATTAGGTGAGGAGGTCTTGCTGCAACGTTCACATTCGGCGGCGAAGAAGCAGAGGTGGCAGAGGAGGAGGAGGGAATTAGAGGAGGTGCAACAAGCCGCCTTCTGCCTGATGGCCTTGTCTTGTGGACTTGTTTTTGCTTGA 435 0.492 MDLLQKETFHEELIDNKKCCTDCKTTKTPLWRGGPSGPKTLCNACGIRYRKKRVSQVGLRLNRGQERKRDKKHSRNGGRAVGNDGDDLEKRLKMNLVALGEEVLLQRSHSAAKKQRWQRRRRELEEVQQAAFCLMALSCGLVFA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03458 144 CDD ZnF_GATA 20 71 IPR000679 GO:0006355|GO:0043565
Accr2g03458 144 ProSitePatterns GATA-type zinc finger domain. 20 45 IPR000679 GO:0006355|GO:0043565
Accr2g03458 144 ProSiteProfiles GATA-type zinc finger domain profile. 20 50 IPR000679 GO:0006355|GO:0043565
Accr2g03458 144 SMART GATA_3 14 72 IPR000679 GO:0006355|GO:0043565
Accr2g03458 144 Pfam GATA zinc finger 20 54 IPR000679 GO:0006355|GO:0043565
Accr2g03458 144 MobiDBLite consensus disorder prediction 60 86 - -
Accr2g03458 144 Gene3D - 15 79 IPR013088 GO:0006355|GO:0008270
Accr2g03458 144 PANTHER OS01G0976800 PROTEIN 12 143 - -
Accr2g03458 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03458 Accr-Chr2 70183247 70184203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03458 10 144 C2C2-Gata Transcription Factor Family AT3G06740 46.324 6.99e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr2g03458 GATA 3.2e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03458 - - qsa:O6P43_011056 167.548