Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03457 ATGATCACGATGGATCTCCTGCAGAAGGAAACGTTTCATGAGGAATTGATTGATAACAAGAAGTGTTGCACTGATTGCAAGACTACTAAGACCCCACTCTGGAGAGGGGGACCTTCTGGGCCCAAGACTCTGTGCAACGCTTGCGGGATAAGATACAGGAAGAAAAGGGTTTCACAGGTGGGATTGAGATTGAACAGAGGACAAGAGAGGAAGAGAGACAAAAAACACAGTCGGAATGGCGGTAGAGCTGTTGGTAATGACGGAGACGATTTGGAGAAGCGTTTGAAGATGAATTTGGTGGCATTAGGTGAGGAGGTCTTGCTGCAACGTTCACATTCGGCGGCGAAGAAGCAGAGGTGGCAGAGGAGGAGGAGGGAATTAGAGGAGGTGCAACAAGCCGCCTTCTGCCTGATGGCCTTGTCTTGTGGACTTGTTTTTGCTTGA 444 0.491 MITMDLLQKETFHEELIDNKKCCTDCKTTKTPLWRGGPSGPKTLCNACGIRYRKKRVSQVGLRLNRGQERKRDKKHSRNGGRAVGNDGDDLEKRLKMNLVALGEEVLLQRSHSAAKKQRWQRRRRELEEVQQAAFCLMALSCGLVFA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03457 147 MobiDBLite consensus disorder prediction 63 89 - -
Accr2g03457 147 Gene3D - 18 82 IPR013088 GO:0006355|GO:0008270
Accr2g03457 147 PANTHER OS01G0976800 PROTEIN 15 146 - -
Accr2g03457 147 CDD ZnF_GATA 23 74 IPR000679 GO:0006355|GO:0043565
Accr2g03457 147 SMART GATA_3 17 75 IPR000679 GO:0006355|GO:0043565
Accr2g03457 147 ProSitePatterns GATA-type zinc finger domain. 23 48 IPR000679 GO:0006355|GO:0043565
Accr2g03457 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 57 - -
Accr2g03457 147 ProSiteProfiles GATA-type zinc finger domain profile. 23 53 IPR000679 GO:0006355|GO:0043565
Accr2g03457 147 Pfam GATA zinc finger 23 57 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03457 Accr-Chr2 70183238 70184203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03457 13 147 C2C2-Gata Transcription Factor Family AT3G06740 46.324 6.80e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr2g03457 GATA 3.3e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03457 - - qsa:O6P43_011056 172.555