Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03438 ATGGAGTCCTTGCAGCCCAACTTAGATTCTATTCATTCCGATACGTTGCCACCATCCACTCTTAAAAAGAGCACCAATTTTGGGGCCGATCCTAATGATCACAATTCTCTCCACCCCGTTCGATGGAGATCCGACACGGAGCGTCGGATCTACTCCTCTAAACTCATCGAAGCTCTGCGCCACGTCCTCCGTCGCAGTCCTTCTCTCCCGCCCAAACGTGGCGGCGGTCATGAAATTCGTGAGACGGCTGATAGAGTTCTAGCCGCGACGGACAAGGGCAGAACTCGATGGAGTCGAGCGATTCTGGCTTCTCCGCTTGGCCGTTGGAGACTACAGAGGCAACACAAGAAGGTGAAGAAGATGACGAGAGGATTGAAGAAACCGGATATTAGGAAGGAGAGAAGGAGGTCACCGGCTCTGCAGAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTTTCCTTTCCAAATCTTCTGGAAGAAACCACTGACTATATATCGGCCTTGGAGATGCAAGTTCGAGCCATGACGACACTCACCGAATTACTCGCCAGTAGTGCCGCGCCGGCCGATCGACTCGAGGGGCTTCGAGCCTAA 609 0.5337 MESLQPNLDSIHSDTLPPSTLKKSTNFGADPNDHNSLHPVRWRSDTERRIYSSKLIEALRHVLRRSPSLPPKRGGGHEIRETADRVLAATDKGRTRWSRAILASPLGRWRLQRQHKKVKKMTRGLKKPDIRKERRRSPALQKKARVLGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMTTLTELLASSAAPADRLEGLRA 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03438 202 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Accr2g03438 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 187 IPR044660 GO:0006355
Accr2g03438 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Accr2g03438 202 MobiDBLite consensus disorder prediction 1 32 - -
Accr2g03438 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 190 IPR036638 GO:0046983
Accr2g03438 202 Gene3D - 114 201 IPR036638 GO:0046983
Accr2g03438 202 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03438 Accr-Chr2 69989617 69990225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03438 41 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.336 1.47e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03438 - - pcin:129310330 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03438 2 69989617 69990225 Accr5g02809 5 53882867 53883463 CCT
Accr2g03438 2 69989617 69990225 Accr5g02809 5 53882867 53883463 ECH
Accr2g03438 2 69989617 69990225 Accr2g03438 2 69989617 69990225 ECH