Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03412 ATGGGCGGAGGTGGAGCGACGCCGAACGTGGAGGCACAGTACTCGTCGGCGAAGATTTCGGTGTGGTGGGACATCGAGAACTGTCATGTCCCCAAGGGCTGCGATCCGCACGCAATCGCCCAGAACATCAGCTCAGCGCTGGTTCAGATGAATTATTGTGGGCCCGTTTCCATCTCCGCCTACGGCGATACTACTCGCATCACGGCTTCTGTACAGCACGCTCTCTCCAGTACAGGAATCTCCCTCAACCATGTCCCAGCCGGTGTTAAAGACGCTAGTGACAAAAAGATTCTCGTCGATATGCTGTTTTGGGCTGTGGATAATCCTGCTCCTGCTAATTATCTATTAATTTCCGGTGATCGAGACTTCTCTAACGCACTTCATCAATTGCGGATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCTTAGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTACTCTCTTAGCTGGAGGACCTCCTCTAACAAATGGTGAATCACAACAATTTGGTAATAATAGCAACCTATCGAGTTCTGACCCCTTACAAATCCCGGGCTCTAGTTCTGTTCAAACAAAGCAACAAAGGGATTCCTTTGCTGAAGTTCACGTAGGAAATCATAACCATAATCATAAATTTTCAAATGCTGGAAGGGGATTAGATTCTAGATATCAGGGTAAAACAACTTGGAGAAGCCCTAGTCAACCAAATGGACCCAAACCATCAAACCAACCGATTGGACTTCAAGAAAATCATAGCAGTATAAACTCTTACCGAGCTGGCAAACCAAATGTTCCCCCAAATGGATCTGCTCCAAATATTGTGCATGGCAGTCCTGGTCAATTATGGGGCAATAGCAGCAATCTACCCGGCAATAGCCAAATGCCTTATTCACAGCCATTAAGACCCAACAATTATCCAATGCAACCTGCTTTTGCACAAAACAACCAATATCCACCAAATACACATTCTTTTGCAACACCAGTAGTGCCTCCTAGAACTGGTGGACTCAACTTCACCTCAGGACCACTTACAAATGTGCCAGATATAGGTAATCTGAATATATCTGCATTGCCAAAACAGAATCCTATCAATAAAGCTCTACATCCTGTAAGGTCAGTTGATGAACAAAATGGACATACAGTACAGAACAACCAACCATTATACCGTGCCCATTCTTTTGGTCCAGATCATCTACCTCCATCTATGGCAGCAATGGGTAGTAATAACCCTCCTGGAAATGGCATGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATTGGGGTTGTTTTGCTTGCCTTGAACACATTAAAAAATGAAAAGATAATGCCAACTGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCCTAAACACCGCAGCACTGATGTTAAGAAGGCTTTGGAGAGTGCTATTGGACAACAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGTTGTATATTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTATAGGTGGTAATCCCAATGAACACTCAAAAGAAACATGGGATGAAATCCAAAAATTTTTAAGCACTCCTTCTGGAAGACTTGCAATAATGGGTACTCAATGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAGATGTTGCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATCGCTAATAAAAAATGGATCATGCATCGTCAGTCAGGATGGCAACCACTTACCATTACTACCTCAGGCGAACTCTGA 1809 0.4345 MGGGGATPNVEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGPPLTNGESQQFGNNSNLSSSDPLQIPGSSSVQTKQQRDSFAEVHVGNHNHNHKFSNAGRGLDSRYQGKTTWRSPSQPNGPKPSNQPIGLQENHSSINSYRAGKPNVPPNGSAPNIVHGSPGQLWGNSSNLPGNSQMPYSQPLRPNNYPMQPAFAQNNQYPPNTHSFATPVVPPRTGGLNFTSGPLTNVPDIGNLNISALPKQNPINKALHPVRSVDEQNGHTVQNNQPLYRAHSFGPDHLPPSMAAMGSNNPPGNGMWGSSGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANITDCIRYGDPKHRSTDVKKALESAIGQQMVVKQNLGALQLYIGKNDKLWKCVNPIGGNPNEHSKETWDEIQKFLSTPSGRLAIMGTQCKYEAGTVIKNMCLKDVALGDVLQILNMVIANKKWIMHRQSGWQPLTITTSGEL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03412 602 Pfam OST-HTH Associated domain 548 596 IPR025677 -
Accr2g03412 602 MobiDBLite consensus disorder prediction 170 206 - -
Accr2g03412 602 CDD PIN_limkain_b1_N_like 18 142 - -
Accr2g03412 602 PANTHER LIMKAIN B LKAP 15 487 IPR024768 GO:0005777|GO:0010468
Accr2g03412 602 MobiDBLite consensus disorder prediction 170 325 - -
Accr2g03412 602 MobiDBLite consensus disorder prediction 286 325 - -
Accr2g03412 602 Gene3D - 10 161 - -
Accr2g03412 602 MobiDBLite consensus disorder prediction 216 270 - -
Accr2g03412 602 Pfam NYN domain 18 154 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03412 Accr-Chr2 69779734 69782263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03412 11 187 C2H2 Transcription Factor Family AT5G61190 73.446 1.63e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03412 - - gmx:100794608 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03412 2 69779734 69782263 Accr2g03412 2 69779734 69782263 ECH