LGRPv2

Gene search

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g03398	155	PANTHER	MADS BOX PROTEIN	10	146	-	-
	Accr2g03398	155	Coils	Coil	93	113	-	-
	Accr2g03398	155	Gene3D	-	13	94	IPR036879	GO:0003677\|GO:0046983
	Accr2g03398	155	SUPERFAMILY	SRF-like	1	82	IPR036879	GO:0003677\|GO:0046983
	Accr2g03398	155	ProSiteProfiles	MADS-box domain profile.	1	50	IPR002100	GO:0003677\|GO:0046983
	Accr2g03398	155	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
	Accr2g03398	155	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	11	50	IPR002100	GO:0003677\|GO:0046983
	Accr2g03398	155	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
	Accr2g03398	155	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
	Accr2g03398	155	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g03398	Accr-Chr2	69625222	69625689	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g03398	1	151	Type I MADS-box Gene Family	AT5G48670	44.444	2.12e-34	120

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Accr2g03398		SRF-TF	3.9e-15	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g03398	-		-	gmx:100792290	159.458