Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03394 ATGGGAAGACACTCTTGCTGCTACAAGCAGAAGCTTAGGAAAGGCCTCTGGTCTCCCGACGAAGACGAGAAGCTTCTCAATTACATCACCAAGCACGGCCATGGCTGTTGGAGCTCCGTCCCCAAACTCGCCGGCTTGCAGAGGTGTGGAAAAAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCGCAGCAGGAAGAGGATTTGATAATTGAACTCCATGCAGTCCTGGGTAACAGGTGGTCACAGATTGCAGCTCAGCTACCAGGAAGAACTGACAATGAGATTAAGAATCTATGGAATTCCTGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCCAACACCCACAAGCCAATCTCTGAGGTTGAAAACGACAAGGACAAGCCCCCCTCAGCCGACAAAAGCCATCACAAAGAACTGTGTATAACAGAGCCTTCAAAGCCAAAGCCAAACGCAGTAATGCCTTCGGAGCGATACCCAGTTGAAGTTTCTTCCGGCTCCAACAAGATCAGCAATAGCTGCAATTTAACCCGCAACCGACCCGCCCAGGATTTGTTCCTCGATAGCTCCATCACCAGTTGTGGTCCTTCTGATATGATGGGTTACTTCTCTTTCCAGCAGTTGAACTATCCACCACAGGTTGGCCTCTCCGCTAATCCCAATGGCGCTCTCTGCTTCATGTCAGGTTCCAGTTCCTCTCAGGTGATGTCAGAGCTCAATTCTAGTGTGCTTAACTCCGTGCCAAGCCCGATTTTCCCAACAACACATGTAAGTACCACTGTGAGTCTCCAGTCTGATAATCCATCCATATCCTCTGGCGATATTGATGGAGTTCAGAACTGGGAAGCCAGTATCCTCGCTAACAACGGCATCAAAAGCAACGGGCGCAGTGGGAGTATCCAATTGCAAAGCAGCAGCAACTTCCTTGAGAACAATAGTTTAGCATGGGCATTGGCAGACTCTGTGAAGGCTAATAAGGATGCTCAAGTACCCCTACAAGCAGACCAAGAAGAAATTAAATGGTCTGAGTATCTGAACACCCCATTTTTCCTGGGGAACACAGCACAGAATCAAAACTGTCAATCTATTTACAGTGAGGTTAAACCAGAGACAGACTTCATAACAGATGAATCAGGTGCCAGTTGGCACCACACCCAGCATCCGTCAGTTTTTCAAGCTTCGGATATCTACACCAAGGATCTGCAAAGATTCTCAGTGGCTTTTGGACAAACCCTGTAG 1269 0.4815 MGRHSCCYKQKLRKGLWSPDEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPISEVENDKDKPPSADKSHHKELCITEPSKPKPNAVMPSERYPVEVSSGSNKISNSCNLTRNRPAQDLFLDSSITSCGPSDMMGYFSFQQLNYPPQVGLSANPNGALCFMSGSSSSQVMSELNSSVLNSVPSPIFPTTHVSTTVSLQSDNPSISSGDIDGVQNWEASILANNGIKSNGRSGSIQLQSSSNFLENNSLAWALADSVKANKDAQVPLQADQEEIKWSEYLNTPFFLGNTAQNQNCQSIYSEVKPETDFITDESGASWHHTQHPSVFQASDIYTKDLQRFSVAFGQTL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03394 422 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr2g03394 422 PANTHER MYB DOMAIN PROTEIN 55 1 319 - -
Accr2g03394 422 SMART sant 66 114 IPR001005 -
Accr2g03394 422 SMART sant 13 63 IPR001005 -
Accr2g03394 422 MobiDBLite consensus disorder prediction 119 154 - -
Accr2g03394 422 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr2g03394 422 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr2g03394 422 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr2g03394 422 FunFam Myb transcription factor 11 67 - -
Accr2g03394 422 CDD SANT 17 61 IPR001005 -
Accr2g03394 422 FunFam MYB transcription factor 68 140 - -
Accr2g03394 422 Gene3D - 11 67 - -
Accr2g03394 422 Gene3D - 68 145 - -
Accr2g03394 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr2g03394 422 MobiDBLite consensus disorder prediction 119 165 - -
Accr2g03394 422 CDD SANT 69 109 IPR001005 -
Accr2g03394 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr2g03394 422 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03394 Accr-Chr2 69568293 69569747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03394 1 422 MYB Transcription Factor Family AT1G09540 49.078 1.19e-122 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g03394 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03394 K09422 - qsa:O6P43_010970 580.482