Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03340 ATGGGGACGGAGAATGGCCAAGACGAAGCAAGCACATCAAATAATGAAGCAGGAACATGCACAAATGAAGAAAACAAGAATCAAACAGAAAAGACAGAAACAGTTCCGTTTCATAAGTTGTTCACATTTGCCGACTCTGCAGATATATTGTTGATGTTTGTTGGCACCATTGGGGCCATTGGAAATGGTGCGGGTTTGCCTCTCATGACGTTGCTGTTCGGCGATATGATTGATTCCTTCGGAAATAACCATAACAGCACCAGCGCTGACATGGTCCATAAAATTTCCAAGGTTTCTCTGAACTTTGTGTACTTGGCGATCGGAATTGGAGCTGCAGCTTTTCTCCAGGTGGCATGCTGGATGGTCACAGGGGAGAGACAGGCCGCGAGGATAAGGGGTTTGTATTTGAAAACAATACTTAGACAAGATGTGGCTTTCTTTGATAAGGAAACAAACACCGGAGAGGTGGTGAGTAGAATGTCAGGCGACACTGTTCTCATACAAGACGCCATGGGTGAAAAGGTCGGAAAATTTCTGCAGCTAACATCAACATTCATTGCCGGTTTTATAATAGCATTTGTGAAAGGGTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTTCTGGTGGTGTCTGGTGCGGCCATGGCCATCATTATAGGCAGGATGGCATCCCAAGGCCAAAATGCTTATGGAAAAGCTGCAAACATCGTTGAACAGACAATTGGCGCAATCAGAACGGTGGCATCCTTCACGGGAGAGAAGCATTCAGCATCTAGTTACAGCAGGTTTCTTGTAGATGCATACAAATCAGGAATTCGTGAAGGTTTGGTAGCTGGATTGGGTATTGGGACAATGATGTTTGTAATTCTCTGCGGCTATGCTTTGGCCACATGGTATGGTGGAAAGTTGATACTGGATAATAAAGGAGGATATAACGGGGGTACAGTGATTACTGTGGTCTTTGCCGTCTTAACTGCTGCCATGAATCTTGGTCAAACAGCCCCTTGTCTGAGTGCTTTTGCGGCAGGCCAAGCGGCAGCTTATAAAATGTTCCAGACTATTGATAGAAAACCGGAGATAGATTCTTATGATGAAAAAGGGAAAGTATTAGAAGATATTCAGGGGGAAATAGAGTTGAGGGACGTTTATTTCAGTTACCCGGCTAGACCCGGGGAGCTGATTTTTGATGGCTTCTCTCTTAAAATCTCAAGTGGCACTACTGCAGCTTTGGTTGGACAAAGTGGAAGTGGGAAGTCCACTGTCATCAGTTTAATAGAAAGATTTTATGATCCCCAGGCAGGTGAAGTTCTCATAGATGGCATTAACTTGAAAGAATTCCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCTAGCATTAAGGATAACATTGCGTATGGAAAAGAAGGAGCAACAACTGAAGAGATAAAAGCTGCAACTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACAATGGTTGGAGACCATGGAACTCAATTGTCTGGGGGGCAGAAGCAACGCATTGCAATTGCAAGAGCAATTCTCAAAAATCCGAAAATCCTACTTCTAGATGAAGCTACGAGTGCACTTGACGCAGAGTCTGAAAGGATTGTGCAAGAGGCTCTAGACAGGATTATGGTAGATAGGACTACTGTTGTTGTGGCACACCGCCTAAGCACAGTGAAAAATGCGGACATGATTGCTGTGATTCACAGAGGAAAGATGGTCGAGAAAGGAACACACACAGAATTGCTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCCTACAAGAAGCAAATAAGGAGGCAGAAGATGGTGCAGATCATGAAAACAAGCGTGAACATTCCTCAGAGTCCTTAAGGCGTTCTACTAGTCAGATAAGGTCATTAGGAAGATCTATAAGTCGAGGATCATCGGCGGGAACTAGCAGCCGCCGCTCATTTTCAGTTGCATTTGGCTTGCCTACTACTACAGTCAACAACAACACTGATCTCAAACAAAGTCCAGAAACTAAAGAACAAGCACCTAAGGTTCCACTTCGCCGCCTTGCTTACCTCAACAAGCCAGAGATCCCAGTGCTTATGCTTGGATCTTTAGCTGCCATAGTGAATGGTGCCGTACTTCCTGTATTTGGCATTTTGATCTCCAGTGCAATCAAGTCATTTTACGAGCCACCTGAACAAATGAAAAAGGATACCAGGTTTTGGGCATTAATGTATATGGTACTTGGTATTGCATCTTTTTTGGCACTTCCTGCAAAAGGGTATCTTTTTGCCGTTGCCGGATGTAAGTTAATCCAACGCATCAGGCAAATGTGCTTTGAGAAAGTAGTAAACATGGAGATAAGTTGGTTTGATGATCCTGAGCACTCAAGTGGTGTAATTGGAGCAAGACTCTCAGGAGAAGCAGCAACTGTGCGTGCACTTGTTGGGGATGCTTTGGGACAATTGGTCGAGAATCTCTCTTCATTACTGGCTGGTTTGATAATTGCTTTCATTGCAAGCTGGCAGTTAGCTTTGATTATTCTTGTTTTGATTCCCTTGATCGGAGTAAACGGATATGTTCAAGTGAAATTCATGAAAGGCTTCAGTGCTGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACTGATGCTGTGGGAAGTATAAGAACAGTGGCTTCTTTTTGTGCTGAAGAGAAGGTGATGGAACTATATAGTAAGAAATGTGAAGGGCCAATGAAATCTGGGATTCACCAGGGTTTGATCAGTGGAACAGGATTTGGGTTATCATTTTTCTTACTCTTTTGCGTCTATGCAACTAGCTTTTATGCGGGAGCTAAACTTGTACAGGCCGGCAAAGCCACATTCTCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCAGCTTTAGCAGTTTCCCAATCAAGCTCTCTTGCGCCTGATTCTGGCAAAGCCAAGGTAGCTGCTACTTCCATATTTGAAATAATTGATAGGAAATCGATGATAGATCCAAGCGACGAGTCAGGAACCACATTGGATAGCGTAAAAGGAGAAATTGAACTTCGTCATGTTAGCTTTAAGTATCCATCCAGGCCAGACGTACAGATTTTCAGAGACCTTAGCCTAGCCATACGTTCTGGAAAGACGGTGGCCCTTGTTGGTGAAAGTGGAAGTGGAAAATCTACGGTGATTTCATTGTTGCAAAGATTTTACGACCCTGATTCAGGTTCAATCACACTTGACGGGATAGAGATTCAAAAGTTCCAACTTAAATGGTTAAGGCAACAAATGGGTCTCGTGAGCCAAGAGCCAATATTGTTCAATGACACTATTCGTGCCAATATTGCCTATGGAAAGGGAGGCAATGCAACAGAAGGAGAGATCATAGCTGCAGCCGAATTAGCCAATGCTCATAAGTTCATCAGTGGCTTACAACAGGGGTATGATACAGCAGTGGGAGAAAGGGGGATTCAATTATCAGGTGGGCAAAAGCAGAGAGTGGCAATAGCACGTGCTATAATTAAAAGTCCAAAGATTTTGTTATTAGATGAAGCAACGAGTGCGCTGGACGCAGAGTCAGAGAGGGTGGTTCAAGATGCATTGGACAAAGTGATGGTGAATAGAACAACTGTGGTTGTGGCACATCGTTTATCTACAATAAAGAATGCAGATGTTATAGCAGTGGTTAAGAACGGAGTCATAGTTGAGAAAGGAAGACATGAGACTTTGATTAACATCAAGGATGGATTCTACGCTTCTTTAGTCCAACTTCATGCGAGCGCTTCAACATCATGA 3846 0.4353 MGTENGQDEASTSNNEAGTCTNEENKNQTEKTETVPFHKLFTFADSADILLMFVGTIGAIGNGAGLPLMTLLFGDMIDSFGNNHNSTSADMVHKISKVSLNFVYLAIGIGAAAFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVSRMSGDTVLIQDAMGEKVGKFLQLTSTFIAGFIIAFVKGWLLSLVMLSTLPLLVVSGAAMAIIIGRMASQGQNAYGKAANIVEQTIGAIRTVASFTGEKHSASSYSRFLVDAYKSGIREGLVAGLGIGTMMFVILCGYALATWYGGKLILDNKGGYNGGTVITVVFAVLTAAMNLGQTAPCLSAFAAGQAAAYKMFQTIDRKPEIDSYDEKGKVLEDIQGEIELRDVYFSYPARPGELIFDGFSLKISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATTEEIKAATELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMVDRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEANKEAEDGADHENKREHSSESLRRSTSQIRSLGRSISRGSSAGTSSRRSFSVAFGLPTTTVNNNTDLKQSPETKEQAPKVPLRRLAYLNKPEIPVLMLGSLAAIVNGAVLPVFGILISSAIKSFYEPPEQMKKDTRFWALMYMVLGIASFLALPAKGYLFAVAGCKLIQRIRQMCFEKVVNMEISWFDDPEHSSGVIGARLSGEAATVRALVGDALGQLVENLSSLLAGLIIAFIASWQLALIILVLIPLIGVNGYVQVKFMKGFSADAKMMYEEASQVATDAVGSIRTVASFCAEEKVMELYSKKCEGPMKSGIHQGLISGTGFGLSFFLLFCVYATSFYAGAKLVQAGKATFSDVFRVFFALTMAALAVSQSSSLAPDSGKAKVAATSIFEIIDRKSMIDPSDESGTTLDSVKGEIELRHVSFKYPSRPDVQIFRDLSLAIRSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKFQLKWLRQQMGLVSQEPILFNDTIRANIAYGKGGNATEGEIIAAAELANAHKFISGLQQGYDTAVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHASASTS 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03340 1281 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1273 IPR003439 GO:0005524
Accr2g03340 1281 ProSitePatterns ABC transporters family signature. 518 532 IPR017871 GO:0005524|GO:0016887
Accr2g03340 1281 MobiDBLite consensus disorder prediction 642 667 - -
Accr2g03340 1281 FunFam ABC transporter B family member 9 39 375 - -
Accr2g03340 1281 ProSitePatterns ABC transporters family signature. 1176 1190 IPR017871 GO:0005524|GO:0016887
Accr2g03340 1281 MobiDBLite consensus disorder prediction 621 641 - -
Accr2g03340 1281 FunFam ABC transporter B family member 1 369 618 - -
Accr2g03340 1281 Gene3D - 377 630 IPR027417 -
Accr2g03340 1281 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1001 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g03340 1281 CDD ABC_6TM_Pgp_ABCB1_D2_like 704 1019 - -
Accr2g03340 1281 SUPERFAMILY ABC transporter transmembrane region 38 363 IPR036640 GO:0005524|GO:0016020
Accr2g03340 1281 FunFam ABC transporter B family member 9 1003 1025 - -
Accr2g03340 1281 MobiDBLite consensus disorder prediction 621 667 - -
Accr2g03340 1281 CDD ABC_6TM_Pgp_ABCB1_D1_like 52 340 - -
Accr2g03340 1281 Pfam ABC transporter 398 546 IPR003439 GO:0005524
Accr2g03340 1281 SMART AAA_5 406 578 IPR003593 GO:0016887
Accr2g03340 1281 SMART AAA_5 1063 1256 IPR003593 GO:0016887
Accr2g03340 1281 Pfam ABC transporter 1055 1204 IPR003439 GO:0005524
Accr2g03340 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1274 IPR027417 -
Accr2g03340 1281 Pfam ABC transporter transmembrane region 52 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g03340 1281 Pfam ABC transporter transmembrane region 715 986 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g03340 1281 FunFam ABC transporter B family member 1 694 1002 - -
Accr2g03340 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 617 IPR027417 -
Accr2g03340 1281 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 379 615 IPR003439 GO:0005524
Accr2g03340 1281 FunFam ABC transporter B family member 1 1026 1276 - -
Accr2g03340 1281 Coils Coil 613 633 - -
Accr2g03340 1281 PANTHER ABC TRANSPORTER B FAMILY 21 619 IPR039421 -
Accr2g03340 1281 MobiDBLite consensus disorder prediction 1 31 - -
Accr2g03340 1281 Gene3D ABC transporter type 1, transmembrane domain 101 1010 IPR036640 GO:0005524|GO:0016020
Accr2g03340 1281 CDD ABC_MTABC3_MDL1_MDL2 379 617 - -
Accr2g03340 1281 CDD ABC_MTABC3_MDL1_MDL2 1036 1274 - -
Accr2g03340 1281 Gene3D - 1026 1280 IPR027417 -
Accr2g03340 1281 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 53 344 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g03340 1281 MobiDBLite consensus disorder prediction 1 25 - -
Accr2g03340 1281 SUPERFAMILY ABC transporter transmembrane region 696 1020 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03340 Accr-Chr2 69025129 69030052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03340 35 1275 Calmodulin-binding Proteins AT2G36910 45.564 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03340 K05658 - gmx:100800034 1974.13