Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03336 ATGAACAAGATATTCCTGCCCGGGGTTGCACTCATATTGGTCGTAGGCTGTGCCGTCGGGACTATTCTTATCGTCAGACAAGGTAAAAGTAGCGGTGACAGTGGCGGCGGCGGCAGCAGCGGGTTGGCCACTCATAGCAAGGCGGTGGCGGCTATATGCCATGGCTCCAACTACCAGAAGGAATGCGAAGATACTTTGGGGGCCGTCAATTCGACGGACCCAAAAGATTACATCGCGGCGGTGTTAGCGAAAGCAATGAAAAAGGTGATAGGCGCCGCTAACATGAGCGACAAGCTCGCCGTCGAACATAAATCCGGCGAAGAAGGTGTTAAGATGGCCATAGAAGATTGCAAGGACCTGTTGCAGTCAGCAATTGATTCACTGGAGGCCTCTAATATGATGATCAAAGGCGGCGATATTAGAAGCATCGAGGACAGAACCGACGACCTCAGGAACTGGTTGGCCATGGTGTTATCTTTCCAACAGTCATGCTACGACGGGTTCGAGGACAAAGGCGGCGAAAAAGAGGTAAGAGATACACTGCACACAGAAGGTGGTCTGGACGGCATACAGAGGCTTACCGCGGTGGCGCTGGATGTTCTCTCCGGCATCAACAATCTGCTTTCTGCATTCAATTTGGATTTGACGGTGAATGTTCCGTCTCGTCGTCTCCTGGAAGAAGAAGATCCCAGTTGGATACATGAAGGTGATCGCAAGCTCTTGGGATCCAACCCGGAACCTAACGTAGTGGTGGCCCAAGACGGCAGTGGCCAATTTAAGACCATCACTGATGCTATTAAATCGTACCCCAAGAAACACCAAGGCAGATTCGTTATCTACGTCAAAGCTGGAATTTATAAAGAGTACCCTCTAGTTGACAAGAAAAAGCCCAATATTTACATGTACGGAGATGGCCCTACAAAAACTATCATCACTGGAAACAGATGCGTCGAACCCAAGAAGAAGTATAAGACCTTTACAAGTGCGACCTTCGCTGTCGCCGGAGACATGTTCATTGCCAAGGGAATAGGATTCGAGAACACAGCTGGGTCTGTCGGACATCAAGCAGTGGCGCTCCGGACGCAAGCACCACATGCGGCATTTTACCAGTGCGCATTCCGAGGTTTCCAAGACACCTTGTACGTGCAAGCAGGGATTCAGCTGATCCGCGAGTGTGAAATAACAGGAACCATCGACTTCATTTTTGGTGCCTCAAGAACTCTAATACAGAAGTCACAGATCATTATGAGGAAGCCAATGGAGAACCAACGGAACATAGTGGTAGCAGATGGGTCCTTGGATCCTAAGGCAGGAACAGGAGTTGTGATTCAGAACAGTGACATCTCCCCAGAGCCAGGGCTTGACAGGAATGTGAATCCTTGCTACTTAGCAAGGCCATGGAAGGCTTACTCTAAGGCCATCTTCATGGAAAGTCCTATTGGTGGTCAGATTCAGCCAGATGGATATCTTCCTTGGACTGGTGATATGTACCTAAAAACATGTTACTTCGCTGAGTATGCCAACACTGGACCTGGTTATAGTCCTAGGACCAGGGTTAAGTGGGGTCGAGGCCAGCTTACAAAGGATCAAGCTTCTGCATATACTGCTACTCGATACCTTGAAGGTGCTGGTGTCCCATGGTTGGCTTCCACTGGTATTCCTTATGATCCTAGCTTCACCAAGTCTTAG 1689 0.4932 MNKIFLPGVALILVVGCAVGTILIVRQGKSSGDSGGGGSSGLATHSKAVAAICHGSNYQKECEDTLGAVNSTDPKDYIAAVLAKAMKKVIGAANMSDKLAVEHKSGEEGVKMAIEDCKDLLQSAIDSLEASNMMIKGGDIRSIEDRTDDLRNWLAMVLSFQQSCYDGFEDKGGEKEVRDTLHTEGGLDGIQRLTAVALDVLSGINNLLSAFNLDLTVNVPSRRLLEEEDPSWIHEGDRKLLGSNPEPNVVVAQDGSGQFKTITDAIKSYPKKHQGRFVIYVKAGIYKEYPLVDKKKPNIYMYGDGPTKTIITGNRCVEPKKKYKTFTSATFAVAGDMFIAKGIGFENTAGSVGHQAVALRTQAPHAAFYQCAFRGFQDTLYVQAGIQLIRECEITGTIDFIFGASRTLIQKSQIIMRKPMENQRNIVVADGSLDPKAGTGVVIQNSDISPEPGLDRNVNPCYLARPWKAYSKAIFMESPIGGQIQPDGYLPWTGDMYLKTCYFAEYANTGPGYSPRTRVKWGRGQLTKDQASAYTATRYLEGAGVPWLASTGIPYDPSFTKS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03336 562 NCBIfam pectinesterase inhibitor domain 43 174 IPR006501 GO:0004857
Accr2g03336 562 PANTHER PECTINESTERASE 18 549 - -
Accr2g03336 562 Gene3D - 242 559 IPR012334 -
Accr2g03336 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 174 IPR035513 -
Accr2g03336 562 CDD PMEI-like_3 51 204 - -
Accr2g03336 562 SMART PMEI_2 44 200 IPR006501 GO:0004857
Accr2g03336 562 Pfam Pectinesterase 248 542 IPR000070 GO:0030599|GO:0042545
Accr2g03336 562 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Accr2g03336 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 205 IPR035513 -
Accr2g03336 562 Pfam Plant invertase/pectin methylesterase inhibitor 48 198 IPR006501 GO:0004857
Accr2g03336 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Accr2g03336 562 SUPERFAMILY Pectin lyase-like 244 555 IPR011050 -
Accr2g03336 562 FunFam Pectinesterase 4 245 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03336 Accr-Chr2 68999605 69001624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03336 9 555 Carbohydrate Esterase AT3G05610 37.163 4.20e-124 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03336 K01051 - gmx:100820142 578.17