Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03315 ATGGGCTCAAAGGTGATGGGGGAACATGCAGCAAATCAAAGTAAAGATGATATGTCCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGACACCATTCTCACCAATTACGTGGCCACTCATGGTGAAGGTCACTGGAATTTCGTCGCTCACTGTGCGGATCTGAATAGAACGGGCAAAAGTTGCAGACTGAGATGGCTAAACTACTTGCGTCCCGATGTTCGGCGCGGAAATATCACACTCCAAGAACAAATATTGATTCTGGACCTCCATTCTCGCTGGGGAAATAGGTGGTCGAAAATTGCAGAGCATTTGCCAGGAAGAACAGACAACGAGATAAAAAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCAGGTGTGAGGTCAACAGCAAACAGTTCAGAGACGCCCTGCGTCACGTTTGGATTCCTCGCTTGCTGGAGCGGGTTCGGGCCTCGTCCGAAGATCAACCCGGTTCGGGGACAGAGCGGAGAAGACCCACTTACTGTTGCACCCCTGTCTATGCGGAACCAGAGCTACGAGTCTCTTCGAATTCAGACAGCCGCGAAACAACGGGTCATCCAATAGGAAACGGGTCGGTGACCCAGGCAGCAGAACAGGGAGACTCGCTCGAGAATCTGTGGAGCGAAGAGAATATATGGTTCTTACGGCAACAACTTTGTGATGAGTTCTAA 702 0.5014 MGSKVMGEHAANQSKDDMSVRKGPWTVEEDTILTNYVATHGEGHWNFVAHCADLNRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLRCEVNSKQFRDALRHVWIPRLLERVRASSEDQPGSGTERRRPTYCCTPVYAEPELRVSSNSDSRETTGHPIGNGSVTQAAEQGDSLENLWSEENIWFLRQQLCDEF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03315 233 Gene3D - 22 74 - -
Accr2g03315 233 CDD SANT 24 69 IPR001005 -
Accr2g03315 233 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr2g03315 233 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Accr2g03315 233 Gene3D - 79 120 - -
Accr2g03315 233 SMART sant 21 71 IPR001005 -
Accr2g03315 233 SMART sant 74 122 IPR001005 -
Accr2g03315 233 MobiDBLite consensus disorder prediction 1 21 - -
Accr2g03315 233 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr2g03315 233 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 186 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr2g03315 233 MobiDBLite consensus disorder prediction 183 206 - -
Accr2g03315 233 FunFam MYB transcription factor 79 142 - -
Accr2g03315 233 FunFam Myb transcription factor 22 74 - -
Accr2g03315 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Accr2g03315 233 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Accr2g03315 233 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr2g03315 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Accr2g03315 233 CDD SANT 79 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03315 Accr-Chr2 68771750 68772704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03315 15 230 MYB Transcription Factor Family AT2G47190 50.397 2.14e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g03315 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03315 K09422 - qsa:O6P43_010892 286.574