Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03290 ATGACATCACCGTTTGAGGAAATTGCGGGGCTAAAAAATCAGCAAGTGACAAGTTCAGCACCAATGAACAATAAGCAGGTTCCACAGTCTTCTTGTTTAGCATACTTGGAGATTCTGAGTAATTACACAAGCAGGTTCAAGAAGCTAAGGGTCCAAGACAGAACCGAACCGAACAATAACAGTGAAGCTCAAGTGGGTGACCAGGAATTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATGTACAATTCTCTTCTCATTGGTATGATGATTATTGCATGCCCCTGCACCCATATGCCTCTGGCCTTGAGGTTCTGTCTGAAGAAGAAAACAAAGATATTGAACTTGCACAGTTTCTTCTCGCTGCGGCCGAGAGGGTTAGTTGCCAACAATATGAACGTGCGAGCAGGATGCTTCTTCATTGTCTATTTAATTCATCTCCCGGCGCAAACTCTATACAGAGAACTATCTTTCACTTTGCTCAAGCACTTAGAGAGAGAATCGAAAAAGAAACCGGGAACACCGCTTTGATGGGATGTGCTAAGAACATAGAGAACGAGCTACGTCAAAAGATGGATACCAGAATAGCTCTTACTTGTCATCAGAAATTCCCAAGCCACCAAGTGCTACAATTCACAGGCGTGCAGGCCATAGTAGAGCACATCACATATGATACAAAAATCCATGTTATAGATCTTGGTATCAGGTACGGAATTCAGTGGACGTGCTTGATGCAGGCACTCGCAGGGAGGAATGAGAGGAAAGTGGAGCTCTTGAAGATAACATCTATAGAAATCGCTGGCCAACCCACCATAGAAGAAACAGGCAAAAGATTGAAGAGTTTCGCTAAATCGTTGAACATGCCATTTGCATGTAAACAAGTTTATGTTGCAGACATGATAGAAATTACAGAACAACAGCTTGAAATTGAAGATGATGAAACTGTGGCTGTCTATTCTCCCTATATACTTTGGAATATGGTATCAAGGCCTGCTTGCATGGAGAGCCTGATGAGTGTTATAAGAAACATCAAACCAACTATAATGATAGTTCTTGAAGTGAACGCCAACCTTAATTCATCCTCGTTTGCGATTCGCTTCGTTGAATCATTGTTCCTCTACTCGGTGTTATTTGACTGCGTTGAGACTTGCCTGAAAGATGAAATTAGTGCCAGAATGGCGACAGAAGCAATATTATCTGAAAGGATAAGAAACATTGTTGCTGCGGAAGGAGGGGAAAGAACAGTGAGGAATGTGGGGATAGAAGTGTGGAGGAGGTTCTTTTCAAGGTACAGAATGGTGGAAATTGGATTTAGTGAGTCGTCTCTGTACCAAGCTAGATTGGTGGCCAGGGAATTCGCTGGTGGCAAATTTTGCACTCTAGACACAAATGGAAAGTGCCTTACAGTTGGTTGGAAGGGGACCCCTATTCATTCTATTTCAGCTTGGAGGTTTGTCTGA 1467 0.4281 MTSPFEEIAGLKNQQVTSSAPMNNKQVPQSSCLAYLEILSNYTSRFKKLRVQDRTEPNNNSEAQVGDQELSAEEIIRVAGARYVQFSSHWYDDYCMPLHPYASGLEVLSEEENKDIELAQFLLAAAERVSCQQYERASRMLLHCLFNSSPGANSIQRTIFHFAQALRERIEKETGNTALMGCAKNIENELRQKMDTRIALTCHQKFPSHQVLQFTGVQAIVEHITYDTKIHVIDLGIRYGIQWTCLMQALAGRNERKVELLKITSIEIAGQPTIEETGKRLKSFAKSLNMPFACKQVYVADMIEITEQQLEIEDDETVAVYSPYILWNMVSRPACMESLMSVIRNIKPTIMIVLEVNANLNSSSFAIRFVESLFLYSVLFDCVETCLKDEISARMATEAILSERIRNIVAAEGGERTVRNVGIEVWRRFFSRYRMVEIGFSESSLYQARLVAREFAGGKFCTLDTNGKCLTVGWKGTPIHSISAWRFV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03290 488 ProSiteProfiles GRAS family profile. 109 486 IPR005202 -
Accr2g03290 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 83 475 IPR005202 -
Accr2g03290 488 Pfam GRAS domain family 119 486 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03290 Accr-Chr2 68526463 68527929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03290 107 487 GRAS Transcription Factor Family AT1G66350 28.906 3.54e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr2g03290 GRAS 3.5e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03290 - - gmx:100791952 575.859