Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03267 ATGTCTGATGATAATGGCAGTGCACTAAAACTATTCGGTTTCCCACTGAGAGAGCAGGAAGAATTTGGTGAAAGACTTAGAGAGGAAGTGGAAGATGAGAGGAAATTCAGGTGCCATTATTGCAAGAAAGCATTCACAAACTCACAAGCATTAGGGGGTCACCAAAATGCTCATAAGAGAGAGCGCCTAAGGGCCAGGCGTTTCCATAGCCAACACACCGATCACAGACGCGTCATACCACAACCACCACCCTTCACCGCCGTGGCCGCCACCAACCACCGCCAACCACCACGCATGCTCTTCAAATCCAATACAACCCACTTTTCATCCACGCCCATTTTCATTCCTTCGCCTTATACTACTACTACTTCTTCCAGGTCCCCATTTCCGCTCCAGTATGCCTCAGCCTCCCTACAACAATCATCGCCTTCTCATGTTGACGCGCTAATGTCACAGAAGGATGTGGGTGTTAATGTTGATGTCCATCTAAGGTTGTCTCTCTCAGATTAG 510 0.4824 MSDDNGSALKLFGFPLREQEEFGERLREEVEDERKFRCHYCKKAFTNSQALGGHQNAHKRERLRARRFHSQHTDHRRVIPQPPPFTAVAATNHRQPPRMLFKSNTTHFSSTPIFIPSPYTTTTSSRSPFPLQYASASLQQSSPSHVDALMSQKDVGVNVDVHLRLSLSD 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03267 169 SUPERFAMILY beta-beta-alpha zinc fingers 32 63 IPR036236 -
Accr2g03267 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Accr2g03267 169 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Accr2g03267 169 Pfam C2H2-type zinc finger 36 60 - -
Accr2g03267 169 Gene3D Classic Zinc Finger 20 81 - -
Accr2g03267 169 PANTHER ZINC FINGER PROTEIN 5 6 168 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03267 Accr-Chr2 68280709 68281218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03267 9 68 C2H2 Transcription Factor Family AT5G06650 46.377 6.02e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g03267 zf-C2H2_6 3.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03267 - - pcin:129309051 149.828