Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03261 ATGGCCACCAGAAATCGAACTGTGCTATTTAGAAAGCACAGAGATGCCGTCAAGAGTGTGCGAGCCCCTTTATCTTCCTCAGCTTCTGGTTCTGGCGGCCCCGTTATTGAAATGGTGAGCACTTCACTTCTCCGTTCGAATCAATCTTCATATGCTCCTCTAAGTACCGAAGATCCAGGCCCTTCGAGTTCGAGAGATGCATTCACTGTGGGATTGCCGCCAGCTTGGGTAGATGATTCTGAAGAAATTGCTGCAAATATACAGCGTGCTCGGGCTAAAATGTCTGAGCTAGTCAAACTTCATGCAAAAGCATTAATGCCCTCTTTTGGTGATGGTAAAGAAGATCAACAACAGATTGAGATTCTCACCCAGGAGATTACAACTCTCTTGAGAAAATCTGAGATGAAGCTAAAAAGACTTTCTGCCACTGGCGGGTCCTCTGAGGATTCAAACATTAGAAAAAATGTGCAGCGTTCCCTTGCTACAGACCTTCAGAACCTGTCAATGGACCTCCGGCGAAAGCAGTCACAATACTTGAAACGGTTGCGGCAGCAAAAGGAGGGATATGATGGGGTTGACTTGGAGATGAATGTGAATGGGTACAAATTTGGTTCACAGGATGATGGATTCAGCGATGTGGATTTCAGTGATCATCAAATGGCAAAGCTAAAGAAGAGCGAGCAATTCTCGGAGGAAAGGGAAAGAGAGATTGAACAGGTCACTAAATCAGTGAATGAACTGGCTCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGACCAGGGAACAATCGTGGATAGAATTGACTACAACATTCAGAATGTTGCTACGTCCGTTGAAGAGGGCTTCAAGCAGTTGGAGAAGGCTGAGAGAACACAGCAAAAAGGAGGAATGGTTACGTGTGCAACTGTGCTTGTTTTAATGTGCTTCGTCATGCTTGTCCTCTTGATACTCAAGGTGATATTGTTTTAG 972 0.4486 MATRNRTVLFRKHRDAVKSVRAPLSSSASGSGGPVIEMVSTSLLRSNQSSYAPLSTEDPGPSSSRDAFTVGLPPAWVDDSEEIAANIQRARAKMSELVKLHAKALMPSFGDGKEDQQQIEILTQEITTLLRKSEMKLKRLSATGGSSEDSNIRKNVQRSLATDLQNLSMDLRRKQSQYLKRLRQQKEGYDGVDLEMNVNGYKFGSQDDGFSDVDFSDHQMAKLKKSEQFSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLEKAERTQQKGGMVTCATVLVLMCFVMLVLLILKVILF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03261 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 289 IPR000727 -
Accr2g03261 323 Pfam SNARE domain 263 315 IPR000727 -
Accr2g03261 323 MobiDBLite consensus disorder prediction 49 63 - -
Accr2g03261 323 MobiDBLite consensus disorder prediction 49 68 - -
Accr2g03261 323 Gene3D - 73 281 - -
Accr2g03261 323 PANTHER SYNTAXIN 79 309 IPR045242 -
Accr2g03261 323 SMART SynN_4 67 183 IPR006011 GO:0016020
Accr2g03261 323 CDD SNARE_syntaxin16 231 288 - -
Accr2g03261 323 SMART tSNARE_6 222 289 IPR000727 -
Accr2g03261 323 SUPERFAMILY t-snare proteins 72 282 IPR010989 GO:0016020|GO:0016192
Accr2g03261 323 FunFam Syntaxin-43 73 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03261 Accr-Chr2 68225393 68230260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03261 1 323 SNARE and Associated Proteins AT5G26980 71.037 8.22e-164 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03261 K08489 - gmx:100803629 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03261 2 68225393 68230260 Accr2g03261 2 68225393 68230260 ECH
Accr2g03261 2 68225393 68230260 Accr5g02834 5 54052026 54055113 ECH