Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03253 ATGGTGTCACTGAAACTTCAGAAGCGGCTCGCCGCTAGCGTCCTCAAGTGCGGCAGAGGCAAAGTTTGGCTCGACCCTAATGAAGTCAATGAAATTTCGATGGCCAATTCTCGCCAAAACATAAGGAAGTTGGTCAAGGATGGTTTCATCATCCGGAAGCCAACCAAGATTCACTCCCGTTCACGTGCCCGTCGAATGAAGGAGGCAAAGAGGAAGGGACGTCACTCTGGATATGGTAAGCGAAAGGGTACCAGAGAGGCACGACTTCCTACAAAGATTCTTTGGATGAGAAGAATGCGTGTGCTCAGACGCTTGCTCCGAAAGTACCGGGAATCAAAGAAAATTGATAAGCATATGTACCATGATATGTACATGAAAGTTAAGGGTAATGTGTTCAAGAATAAGAGAGTCCTTATGGAGAGCATTCACAAATCCAAGGCTGAGAAGGCAAGAGAGAAGACTTTGAGCGATCAGTTTGAGGCTAAGCGTGCAAAGAACAAGGCAAGTCGGGAAAGGAAATTCGCAAGGAGGGAGGAACGATTGGCTCATGGTCCTGGAGAAAAACCTGCTGCAGTACCTAGCTCACAACCTGCTACACCTTCTCAGGCAGCCCCAGCATCAAAAAAATCCAAGAAGTGA 639 0.4742 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAHGPGEKPAAVPSSQPATPSQAAPASKKSKK 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03253 212 Gene3D - 57 187 - -
Accr2g03253 212 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Accr2g03253 212 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Accr2g03253 212 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Accr2g03253 212 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Accr2g03253 212 MobiDBLite consensus disorder prediction 149 185 - -
Accr2g03253 212 MobiDBLite consensus disorder prediction 149 212 - -
Accr2g03253 212 MobiDBLite consensus disorder prediction 57 85 - -
Accr2g03253 212 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Accr2g03253 212 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Accr2g03253 212 FunFam Ribosomal protein L19 1 56 - -
Accr2g03253 212 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Accr2g03253 212 MobiDBLite consensus disorder prediction 57 79 - -
Accr2g03253 212 FunFam Ribosomal protein L19 57 192 - -
Accr2g03253 212 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Accr2g03253 212 MobiDBLite consensus disorder prediction 194 212 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr2g03253 Accr-Chr2 68114188 68115979 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03253 1 209 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.211 1.06e-127 357
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03253 K02885 - csv:101206670 358.607
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03253 2 68114188 68115979 Accr2g03253 2 68114188 68115979 ECH