Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03250 ATGTGTGGTGGTGCTATTATCGCCGACTTCATCCCCCGCCATCGCGGTCGCCGCCTTACCGCATCTGACATCTGGCCCAACTCTCTCGGCAAGTCCAATGACGATTCCGGCTTCGATTTCCATTTTCCTCAGTCCGACCACTCTGCCTCCTGCAAATCATCCAATCATTTCCAAGGATCAGCTGATGAACAAGCTGAGAAGCCCTCCGTGAAGAGGCAGAGGAAGAACCTCTACCGTGGGATCAGGCAGCGTCCCTGGGGTAAATGGGCTGCTGAGATTCGCGACCCCAGAAAGGGGGTTCGTGTTTGGCTTGGTACCTTCAACACTGCTGAAGAAGCCGCCAGGGCCTATGACAGAGAAGCTCGCAAAATCCGCGGTAAGAAAGCCAAAGTCAATTTTCCCAATGAAGACGATGCCTATTCCCTTCAGGCTCGTCGTAATAATCCACCGCCTCCGCTCCGATCCCCAATTTCTCCCCTGTATCCACAACAGTACGGCTCAAACTTGAACAATGCGCCTAAAAGTTTTAATCTAGAGTTTGGTTATGATCTGAACCAGACGGGCACAGTTCCTTCCCTTGGATTCGATGCCGATCCAACTCTTGTTTCTAGAGATGAGAATTCTGGATGCGGGTCAGGGTCTGGTTCCGAGGGTATCTTCTCCATCGTGCAATTAGTGGGCTCGGGTCAGAAAGGAAACGGCTACTCCTCTCAGAGTTCGAATGTGGACGTGGAAGGAAAAGCGAACGAAGTGGTGATGGAAGCCGAGGAAGAGAAGGATGAGATACAGAAGCTGTCGGAGGAGCTGATGGCGTACGAGAACTACATGAAGTTTTATCAGATTCCGTATTACGACGGGCAATCGGCGGCGTCCAATAATGTTCAGGAAAACGTGGTGGGTGATCTGTGGAGCTTCGACGACGAGGCCGTACCCGCTTCGGCGACGTCATCGGCCCTGTGA 960 0.525 MCGGAIIADFIPRHRGRRLTASDIWPNSLGKSNDDSGFDFHFPQSDHSASCKSSNHFQGSADEQAEKPSVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSLQARRNNPPPPLRSPISPLYPQQYGSNLNNAPKSFNLEFGYDLNQTGTVPSLGFDADPTLVSRDENSGCGSGSGSEGIFSIVQLVGSGQKGNGYSSQSSNVDVEGKANEVVMEAEEEKDEIQKLSEELMAYENYMKFYQIPYYDGQSAASNNVQENVVGDLWSFDDEAVPASATSSAL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03250 319 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 MobiDBLite consensus disorder prediction 46 62 - -
Accr2g03250 319 MobiDBLite consensus disorder prediction 36 73 - -
Accr2g03250 319 FunFam Ethylene-responsive transcription factor 2 76 135 - -
Accr2g03250 319 SUPERFAMILY DNA-binding domain 77 135 IPR016177 GO:0003677
Accr2g03250 319 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Accr2g03250 319 MobiDBLite consensus disorder prediction 135 168 - -
Accr2g03250 319 CDD AP2 78 135 IPR001471 GO:0003700|GO:0006355
Accr2g03250 319 Coils Coil 248 275 - -
Accr2g03250 319 PANTHER DNA-BINDING DOMAIN 54 253 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03250 Accr-Chr2 68094317 68095353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03250 1 135 AP2-EREBP Transcription Factor Family AT3G16770 55.797 8.76e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g03250 AP2 9.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03250 K09286 - gmx:100780763 359.762