Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03244 ATGGCTTCCAAGCTATCTACCCTCTCAACAACAATGGCATTTCTTCTTCTCCTTCCCTTATTCACCACCTTAGCATTTGCAGACACTTCACCTTCAACTCCGATCAGCCCAGGAACTGCATGTAGTTCCACACCTGACCCTTCTTATTGTAACTCCGTTCTCCCACCCAACCAGAAAGGCAATGTGTACGACTATGGCCGCCTCTCCGTCAGCAAATCCCTCTCACAGTCTCGTAAATTCTTGACCCTCGTCGATAAGTATCTCCAGCGACGATCTGCTTTACCCGCCGCCGCCGTTCGTGCCCTCGAAGATTGCCGGACCCTGGGCGAGCTCAACTACGATTTCCTCTCAAATTCATTCCAAACTGTGAACAAGACCACTAGGCTTCTTCCCAGTTTACAAGCTGACAATATCCAAACCCTTCTCAGTGCTATCTTAACTAACCAACAGACCTGTTTGGATGGCCTTAAAGACACCGCTTCGGCTTGGAGTGTTAAGAACGGACTTTCCGTACCTCTTTCTAATGATACCAAGCTGTACAGTGTGTCCCTGGCTCTGTTCTCAAAAGGTTGGGTTCCTAATGCCAAGAAAAAAACGACGGCGTTTCAGCCAACCAAGAAACAGCTTGCCTTTGGAAATGGGCGATTGCCGCTTAAAATGTCAAGCAGGAACCTGGCCATCTACCGGTCAGTGAGTCAGAGAAAAATGCTTCAGTCAGCCACCGTGGGCGGTGACGTGGTTGTGGTGAACGACGTCGTGACGGTGAGACAGGACGGAACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCCGCTCCAAACAAGTCTTCCTCGACCGGCGGCTACTTCCTTATCTACGTCAGCGCAGGTGTTTATGAAGAATACGTCAACATTGATAAGAAGAAGACTTACTTGATGATGATGGGAGACGGTATCAACAAGACAATCATCACCGGCAACCGAAGTGTCGTTGACGGCTGGACCACCTTCAACTCCGCAACTTTTGCTGTATCGGGGCAAGGATTTGTGGGGGTGAACATGACGATTCGTAACACGGCAGGGCCAGAAAAGCACCAGGCCGTTGCACTTAGAAACGGAGCAGATTTATCGACGTTTTACAGTTGCAGCTTTGAGGGGTACCAGGATACATTATATGCGCATTCTCTGAGACAGTTCTACAGAGAATGTGATATATACGGCACCGTAGATTTCATATTCGGCAACGCCGCCATGGTCCTCCAAAACTGCAATCTGTATCCTCGTTTACCCATGAGCGGGCAGTTCAACGCCGTCACGGCACAGGGGCGAACCGACCCGAATCAAAACACGGGCATTTCAATCCATAACTGTAGCATCAGAGCAACCGACGATTTGGCGGCCACCAATGGTTCTGTGAGCACGTATCTTGGAAGGCCATGGAAGGAGTATTCGAGGACAGTTTATATGGAGAGCTTCGTGGATAGTGTCATAGCGAGTGCGGGTTGGCAGAAATGGGACGGTGATTTTGCGTTAAGCACTCTGTATTATGCAGAGTTCAATAACAGGGGACCTGGGTCTAGCACCGCCGACAGAGTGACATGGCCTGGCTACCATGTCATTAACGCCACGGACGCCGCTAATTTCACGGTGGCCAACTTTTTGCTGGGAGATGACTGGTTGCCTCGCACTGGAATCACTTACACCAGCACATTGCTATAG 1701 0.4997 MASKLSTLSTTMAFLLLLPLFTTLAFADTSPSTPISPGTACSSTPDPSYCNSVLPPNQKGNVYDYGRLSVSKSLSQSRKFLTLVDKYLQRRSALPAAAVRALEDCRTLGELNYDFLSNSFQTVNKTTRLLPSLQADNIQTLLSAILTNQQTCLDGLKDTASAWSVKNGLSVPLSNDTKLYSVSLALFSKGWVPNAKKKTTAFQPTKKQLAFGNGRLPLKMSSRNLAIYRSVSQRKMLQSATVGGDVVVVNDVVTVRQDGTGNFTTINDAIAAAPNKSSSTGGYFLIYVSAGVYEEYVNIDKKKTYLMMMGDGINKTIITGNRSVVDGWTTFNSATFAVSGQGFVGVNMTIRNTAGPEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAMVLQNCNLYPRLPMSGQFNAVTAQGRTDPNQNTGISIHNCSIRATDDLAATNGSVSTYLGRPWKEYSRTVYMESFVDSVIASAGWQKWDGDFALSTLYYAEFNNRGPGSSTADRVTWPGYHVINATDAANFTVANFLLGDDWLPRTGITYTSTLL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03244 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Accr2g03244 566 FunFam Pectinesterase 38 189 - -
Accr2g03244 566 SUPERFAMILY Pectin lyase-like 249 564 IPR011050 -
Accr2g03244 566 CDD PMEI-like_3 39 191 - -
Accr2g03244 566 NCBIfam pectinesterase inhibitor domain 11 187 IPR006501 GO:0004857
Accr2g03244 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Accr2g03244 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Accr2g03244 566 FunFam Pectinesterase 246 565 - -
Accr2g03244 566 PANTHER PECTINESTERASE 25 555 - -
Accr2g03244 566 SMART PMEI_2 32 186 IPR006501 GO:0004857
Accr2g03244 566 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Accr2g03244 566 Gene3D - 247 565 IPR012334 -
Accr2g03244 566 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03244 Accr-Chr2 68027282 68029081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03244 15 566 Carbohydrate Esterase AT4G02330 62.281 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03244 K01051 - gmx:100800971 886.715