Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03212 ATGAAGTTCTGCAAGACGTACCAGGAGTACATGCAAGGGCAGGAGAAGAAACTGCCAGGGGTTGGCTTCAAGAAGCTCAAGAAGATCTTGAAGACATGCAGAGTAGACTATCAATCCCTGCAGAATCAAAATGCCGTCGTCGACGAAGCCCCAGCCCCCACCGTCCGATCATGCCCTGATCAATGCCCAGTGTGCGATGGGACTTTCTTCCCTTCACTTCTCAATGAAATGTCAGAAATAGTAGGCTGCTTTAATCAGCGAGCGCAGAAATTATTAGACCTACATCTTGCTTCTGGCTTCAGAAAGTACTTGTTTTGGATCAAAGGCAAATTGCGAGGAAACCATACCGCTCTCATTCAGGAAGGCAGAGATTTGGTTACCTATGCACTGATCAATGCCGTTGCCATTCGAAAAATACTCAAGAAGTATGACAAGGTTCATTATTCGAAGCAAGGCCAATTGTTCAAGTCTCAAGTTCAGAGTATGCATATGGAAATTCTTCAGAGTCCTTGGTTTTGTGAGATGATGGCCTTGCACATCAATTTAAGGGAAACCAAGCCCCAGTCCAGGAACGCAGCTGTTTTGTTTGATGGATGTTCTCTGACATTCAAGGATGGAAAACCATCAATCACTTGTGAGCTCTGTGATTCAATCAAGCTTGATATCGACTTGACTTGTTCTATATGCTTGGACACAGTATTTGATCCAGTTTCTCTTACTTGTGGCCACCTATTCTGCTACATGTGTGCTTGCTCGGCTGCATCAGTCACTATTGTTGATGGACTCAAGGAAGCAGATTCTAAAGCAAAATGTCCCCTCTGCCGAGAGGGTGGAGTTTATGAAGGTGCTATCCACTTGGAAGAATTGAACATTCTGTTAGGGCGAAGGTGCCAAGAATACTGGGAAGAAAGACTTCAGGCGGAGAGGACAGAGAGGCTTAAGCAGATAAAGGAGCATTGGCAATCAGAGTGCAGGGCTGTATTGGGCGTCTGA 993 0.4542 MKFCKTYQEYMQGQEKKLPGVGFKKLKKILKTCRVDYQSLQNQNAVVDEAPAPTVRSCPDQCPVCDGTFFPSLLNEMSEIVGCFNQRAQKLLDLHLASGFRKYLFWIKGKLRGNHTALIQEGRDLVTYALINAVAIRKILKKYDKVHYSKQGQLFKSQVQSMHMEILQSPWFCEMMALHINLRETKPQSRNAAVLFDGCSLTFKDGKPSITCELCDSIKLDIDLTCSICLDTVFDPVSLTCGHLFCYMCACSAASVTIVDGLKEADSKAKCPLCREGGVYEGAIHLEELNILLGRRCQEYWEERLQAERTERLKQIKEHWQSECRAVLGV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03212 330 CDD SPX_BAH1-like 2 153 - -
Accr2g03212 330 ProSitePatterns Zinc finger RING-type signature. 241 250 IPR017907 -
Accr2g03212 330 ProSiteProfiles SPX domain profile. 1 157 IPR004331 -
Accr2g03212 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 328 IPR013083 -
Accr2g03212 330 Pfam Zinc finger, C3HC4 type (RING finger) 226 274 IPR018957 GO:0046872
Accr2g03212 330 ProSiteProfiles Zinc finger RING-type profile. 226 275 IPR001841 -
Accr2g03212 330 CDD RING-HC_BAH1-like 216 289 - -
Accr2g03212 330 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 329 IPR033326 -
Accr2g03212 330 SMART ring_2 226 274 IPR001841 -
Accr2g03212 330 SUPERFAMILY RING/U-box 219 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03212 Accr-Chr2 67813918 67815941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03212 223 275 C3H Transcription Factor Family AT4G28270 43.103 2.26e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03212 K16275 - gmx:100797432 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03212 2 67813918 67815941 Accr2g03212 2 67813918 67815941 ECH