Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03184 ATGGGCAAAAACATGGAGTTTCAGGACGCTGTCAGTTTTGTGGTCCAAGGATCGTTACAGAAAAATCGAGTTTCTCACAAAGCAACAGAATCAGACGCCGTCACTTCCGGCCGGAAATGGAAGATCTTCTACCGGCCATCGTCGACTTTCGCTTCCAAAAAGAAACAGCCCCCCGAAGAATTTCTCTGCCCCATATTAGGGTCTCTCATGGCAGACCCCGTCATCGTCTCCTCAGGCCACACCTTCGAGCGAGTCTCTGTTCAAGCTTGTAAAACTATAAACTTCACACCCCGCCTCTCCGATGGCTCCACGCCCGATTTTTCTACCGTAATTCCCAACCTTGCCCTTAAATCTGCAATTGCTAAATGGTGCCACAACTCCGCCAACCTACTCCCCGAGCCGCCTGATGTAGCTTCTTCTGAGAAGTTCGTGCTTAGTCTGATGACGAGAAACCAGAAGACAGATTCAAGCATCCAGAACAAAACAGAATCGCAGAAGGTAGTAATCACAGAGGAAGAGCTGATTCAAGGAATGAAGGAGAACCCACCTGTGAATTTCAATCACGCAGCGACCGAGGTCAATCGACGGCCAGCTCATCCTTACTGGAACTCAGAGGAATCGGCGGGTTCCTCTCCTGCATCTCCGCCCATGCAACTCTCAACTCGACCAAGCTGCTATTCCTCTGCTTCATCCTCAGAAATCGAAGTCATTGTTCATTGCTCCCCTGAAGAAGAGAACATCTTAGCCAAGCTAAGAAGCTCACAAGTGTCTGAGATCGATGAAGCCGCTATTTCACTAAGAAAGCTCACCAAGACTAGAGAGGATACCAGGGCCCAAATCTGCAGTCCTCGGTTACTCTCTGTCCTTCGATCGTTGGTCGTGTCCAAGTACGCTAATATTCAGGTGAACGCGGTCGCAGCTCTGGTGAATCTCTCATTGGAGAAAGTGAACAAAGTAAAGATACTCCGCTCCGGAATCGTTCCTCCCTTGGTTGACGCATTGAAAGGAGGATGTCCTGAGGTGCAGGAACACGCTTCCGGCGCAATCTTCAGCTTGGCCGTTCACGACGATAACAAGACTGCGATCGGCGTGCTGGGTGCTCTGCCGCCGCTGCTCCACTTGCTCCAATCCGAGAACGAGCGGACGCGGAATGACTCGGCGCTCGCACTGTACCACCTCTCCCTCGTACAGAGCAACCGGACCAAGATGATAAAACTCGGGTCGGTTCCGACCCTGACGAGCATGTTAAAGTCGGGTAAAATGAGGGGTCACGTGCTACTCATACTATGCAACTTGGCGTCTTGTGGCGATGGCCGGGCGGCGATGTTGGATGCGCAGGCGGTGGAGTGCTTGGTGGGGCTGCTAAGCGGCAGCGAATTGGGTTCCGGGTCGACCCGGGAGAGCTGCGTGGCGGTGTTATATGCGCTGAGTCACGGCGGGTTGAGGTTTAAAGCGGTGGCGAGGGCGGCGGGGGTGGTGGAGGTGTTGAAGAAGGAGGAGAAGGTGGGAAGCGAGAGGGCGAGGGAGAAGGTGAAGAGGATATTGGAGATGATGAGGGTGAAGGAGGAAGCCGAAGAAGACGACGTCGACTGGGAGGCGCTTCTTGACTCGGGGCTGTGTAGCCTGAGTCAGTTGCCCGAGTTATGA 1647 0.5337 MGKNMEFQDAVSFVVQGSLQKNRVSHKATESDAVTSGRKWKIFYRPSSTFASKKKQPPEEFLCPILGSLMADPVIVSSGHTFERVSVQACKTINFTPRLSDGSTPDFSTVIPNLALKSAIAKWCHNSANLLPEPPDVASSEKFVLSLMTRNQKTDSSIQNKTESQKVVITEEELIQGMKENPPVNFNHAATEVNRRPAHPYWNSEESAGSSPASPPMQLSTRPSCYSSASSSEIEVIVHCSPEEENILAKLRSSQVSEIDEAAISLRKLTKTREDTRAQICSPRLLSVLRSLVVSKYANIQVNAVAALVNLSLEKVNKVKILRSGIVPPLVDALKGGCPEVQEHASGAIFSLAVHDDNKTAIGVLGALPPLLHLLQSENERTRNDSALALYHLSLVQSNRTKMIKLGSVPTLTSMLKSGKMRGHVLLILCNLASCGDGRAAMLDAQAVECLVGLLSGSELGSGSTRESCVAVLYALSHGGLRFKAVARAAGVVEVLKKEEKVGSERAREKVKRILEMMRVKEEAEEDDVDWEALLDSGLCSLSQLPEL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03184 548 MobiDBLite consensus disorder prediction 204 224 - -
Accr2g03184 548 SUPERFAMILY RING/U-box 49 132 - -
Accr2g03184 548 PANTHER U BOX DOMAIN-CONTAINING 34 519 - -
Accr2g03184 548 FunFam RING-type E3 ubiquitin transferase 242 518 - -
Accr2g03184 548 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 366 408 IPR000225 GO:0005515
Accr2g03184 548 Coils Coil 259 279 - -
Accr2g03184 548 SMART arm_5 396 434 IPR000225 GO:0005515
Accr2g03184 548 SMART arm_5 273 313 IPR000225 GO:0005515
Accr2g03184 548 SMART arm_5 355 395 IPR000225 GO:0005515
Accr2g03184 548 SMART arm_5 314 354 IPR000225 GO:0005515
Accr2g03184 548 SMART arm_5 435 478 IPR000225 GO:0005515
Accr2g03184 548 Gene3D - 243 520 IPR011989 -
Accr2g03184 548 ProSiteProfiles U-box domain profile. 56 130 IPR003613 GO:0004842|GO:0016567
Accr2g03184 548 Pfam U-box domain 58 126 IPR003613 GO:0004842|GO:0016567
Accr2g03184 548 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 325 362 IPR000225 GO:0005515
Accr2g03184 548 SMART Ubox_2 60 123 IPR003613 GO:0004842|GO:0016567
Accr2g03184 548 MobiDBLite consensus disorder prediction 200 224 - -
Accr2g03184 548 Pfam Kinesin-associated protein (KAP) 296 442 - -
Accr2g03184 548 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 131 IPR013083 -
Accr2g03184 548 SUPERFAMILY ARM repeat 246 514 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03184 Accr-Chr2 67635147 67636793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03184 54 544 U-box Gene Family AT5G40140 55.332 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03184 - - qsa:O6P43_004571 649.432