Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03158 ATGGAGTCCGGCCGTCTTTTCTTCGGGTCCGCTTGCCGCGGCAACATGCTGTTTCTCGGGAATGGTGATTCAGTTTATAGAGGAGGATCGATAATAAGCATGGAGGAAAGCTCAAAGAAACGACCATTTTTCAGCTCACCGGAGGAACTGTTCGATGAGGAATATTACGATGAGCAGCTGCCGGAGAAGAAGCGACGCCTCACTCCCGAACAGGTGCTTCTGCTGGAGAAAAGCTTTGAGGAGGAGAACAAGCTGGAGCCGGAACGGAAGACCGAGCTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAGGTGGCTGTGTGGTTTCAGAACCGTAGGGCTCGTTGGAAAACCAAGCAACTTGAAAGGGATTACGATGTTCTCAAGTCTTCCTACGATGCCCTCCTTTCAAAGTACGATTCCATTATCAAAGACAATGAAAAGCTAAAATCAGAGGTGGTAGCCTTAAACGAGAAGCTTCTAGCTAAAGAGATGCCAGGAGAAGCGTTACCGGAAGAAAAAGCAGTGCCACTCATAATGGAACTAGCCCAAATGTCAACCCTGCCTTTCAACGTGAAGTTGGAGGACCGACTCAGCAGTGGGAGTGGTGGAAGTGCAGTGGTGGATGAGGATGCTCCCCAGCTTGTTGTGGACAGCGTTAATTCCTACTTTTCAGCTGAAAACTTTGAAGGATGCTTGGCCAGAGTTGATAGGGTTCAGTCGTCGTCATCAGAGGATGGTAGCGACGATGGTGGGAGTTACTTCTCTGATGTGTTTGTGGCCCCTGAACCTGAGCACCAACACCACGAGGAGGGAGAGGCGTTGTATTGGTGGGCGTGGTCTTAA 843 0.5042 MESGRLFFGSACRGNMLFLGNGDSVYRGGSIISMEESSKKRPFFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDALLSKYDSIIKDNEKLKSEVVALNEKLLAKEMPGEALPEEKAVPLIMELAQMSTLPFNVKLEDRLSSGSGGSAVVDEDAPQLVVDSVNSYFSAENFEGCLARVDRVQSSSSEDGSDDGGSYFSDVFVAPEPEHQHHEEGEALYWWAWS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03158 280 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Accr2g03158 280 SMART HOX_1 61 122 IPR001356 GO:0003677
Accr2g03158 280 Pfam Homeobox associated leucine zipper 118 159 IPR003106 GO:0006355|GO:0043565
Accr2g03158 280 FunFam Homeobox-leucine zipper protein HAT5 56 120 - -
Accr2g03158 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 52 218 IPR045224 GO:0003700
Accr2g03158 280 SUPERFAMILY Homeodomain-like 56 120 IPR009057 -
Accr2g03158 280 CDD homeodomain 63 119 IPR001356 GO:0003677
Accr2g03158 280 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Accr2g03158 280 Gene3D - 57 124 - -
Accr2g03158 280 Coils Coil 131 158 - -
Accr2g03158 280 PRINTS Lambda-repressor HTH signature 89 98 IPR000047 GO:0003677
Accr2g03158 280 PRINTS Lambda-repressor HTH signature 98 114 IPR000047 GO:0003677
Accr2g03158 280 Pfam Homeodomain 63 116 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03158 Accr-Chr2 67428313 67430381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03158 1 279 Homeobox Transcription Factor Family AT3G01470 58.276 1.47e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr2g03158 Homeodomain 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03158 K09338 - qsa:O6P43_008987 384.03