Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03157 ATGGAGTCCGGCCGTCTTTTCTTCGGGTCCGCTTGCCGCGGCAACATGCTGTTTCTCGGGAATGGTGATTCAGTTTATAGAGCAGGAGGATCGATAATAAGCATGGAGGAAAGCTCAAAGAAACGACCATTTTTCAGCTCACCGGAGGAACTGTTCGATGAGGAATATTACGATGAGCAGCTGCCGGAGAAGAAGCGACGCCTCACTCCCGAACAGGTGCTTCTGCTGGAGAAAAGCTTTGAGGAGGAGAACAAGCTGGAGCCGGAACGGAAGACCGAGCTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAGGTGGCTGTGTGGTTTCAGAACCGTAGGGCTCGTTGGAAAACCAAGCAACTTGAAAGGGATTACGATGTTCTCAAGTCTTCCTACGATGCCCTCCTTTCAAAGTACGATTCCATTATCAAAGACAATGAAAAGCTAAAATCAGAGGTGGTAGCCTTAAACGAGAAGCTTCTAGCTAAAGAGATGCCAGGAGAAGCGTTACCGGAAGAAAAAGCAGTGCCACTCATAATGGAACTAGCCCAAATGTCAACCCTGCCTTTCAACGTGAAGTTGGAGGACCGACTCAGCAGTGGGAGTGGTGGAAGTGCAGTGGTGGATGAGGATGCTCCCCAGCTTGTTGTGGACAGCGTTAATTCCTACTTTTCAGCTGAAAACTTTGAAGGATGCTTGGCCAGAGTTGATAGGGTTCAGTCGTCGTCATCAGAGGATGGTAGCGACGATGGTGGGAGTTACTTCTCTGATGTGTTTGTGGCCCCTGAACCTGAGCACCAACACCACGAGGAGGGAGAGGCGTTGTATTGGTGGGCGTGGTCTTAA 846 0.5047 MESGRLFFGSACRGNMLFLGNGDSVYRAGGSIISMEESSKKRPFFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDALLSKYDSIIKDNEKLKSEVVALNEKLLAKEMPGEALPEEKAVPLIMELAQMSTLPFNVKLEDRLSSGSGGSAVVDEDAPQLVVDSVNSYFSAENFEGCLARVDRVQSSSSEDGSDDGGSYFSDVFVAPEPEHQHHEEGEALYWWAWS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03157 281 CDD homeodomain 64 120 IPR001356 GO:0003677
Accr2g03157 281 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Accr2g03157 281 Coils Coil 132 159 - -
Accr2g03157 281 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Accr2g03157 281 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Accr2g03157 281 SMART HOX_1 62 123 IPR001356 GO:0003677
Accr2g03157 281 SUPERFAMILY Homeodomain-like 57 121 IPR009057 -
Accr2g03157 281 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Accr2g03157 281 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Accr2g03157 281 FunFam Homeobox-leucine zipper protein HAT5 57 121 - -
Accr2g03157 281 Gene3D - 58 125 - -
Accr2g03157 281 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Accr2g03157 281 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 53 219 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03157 Accr-Chr2 67428313 67430381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03157 1 280 Homeobox Transcription Factor Family AT3G01470 58.276 9.33e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr2g03157 Homeodomain 2.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03157 K09338 - qsa:O6P43_008987 385.571