Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03140 ATGGACAGCAGAATCGAGTACGCAGAAACTCACAGGAACAAGTGTGCAGCGTGCTTCAGGCAGTTCAACAAGTTGGAGCACTTAGTGGAACACATGAGGATCTCATATCATTCGGTTCACGAACCCACTTGTGGCATTTGTGGCAAACACTGCAGATCATTTGAGTCTCTGAGGGAACACCTTATAGGTCCATTACCAAAGCAGGAGTGCAGAGATATTTTTGCGAACCGAGGATGCAGGTTTTGCTTGAAGGTCCTCGACAGCCCTTACTCTCGAAGGATCCACCAAGAAAGATGCCAACTTTCTGCAAATACGGGATTAATTGGACGTTTTGCAAACCTGGGGATTCGTGATAATTTGACTATTGGGAAAGGGCCGCAAGTAGTTGCGCTTGCTTGCAAAATGGTGGGAGGTGGCAGTGACGGTTCACTTGATCTCTGTGCCAGAGTCTGCATAATTGATGAGCGCGAAAACATCTTATTCCATTCTTACGTGAAGCCTCCAATTCCTGTCACCAACTACAGGTATGAGACAACAGGGCTTCGACCAGAATACTTGAGGGACGCAATGACGATGAGGCAAGTGCAGAGGAAGATTCAAGACTTCCTCTGCAACGGAGAACCCGTGTGGAAGATTCGACCCAAGAGTGGCCGAGCCAGGATTCTGGTAGGTCATGGGCTAGATCACGACCTCGAGTCTCTCCAAGTGGAATACCGGTCAGAAATGATAAGGGACACTGAGAAATACCCTCCATTGATGAAGACAAGCAAGCTGAGCAACTCACTCAAGTACTTGACACAAGTATATCTAGGGTATGAGATTCAGACTGGGATACAGGACCCATATGACGATTGTGTGGCAACGATGAGGCTGTACATGAGGATGAGGTCCCAGGCACACAAAATAGAGGAATACCCTTTGGCTTCAGATCCTCAAAATAAGAACAATTTCGCGTCATGGAGGCAAAGAGAGTTAGAGAGAATGAGCCCAGATCAAATGCTTGCAATCTCCAGGTCTGACTATTACTGCTGGTGCCTCGATTCCATCTAG 1050 0.4743 MDSRIEYAETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICGKHCRSFESLREHLIGPLPKQECRDIFANRGCRFCLKVLDSPYSRRIHQERCQLSANTGLIGRFANLGIRDNLTIGKGPQVVALACKMVGGGSDGSLDLCARVCIIDERENILFHSYVKPPIPVTNYRYETTGLRPEYLRDAMTMRQVQRKIQDFLCNGEPVWKIRPKSGRARILVGHGLDHDLESLQVEYRSEMIRDTEKYPPLMKTSKLSNSLKYLTQVYLGYEIQTGIQDPYDDCVATMRLYMRMRSQAHKIEEYPLASDPQNKNNFASWRQRELERMSPDQMLAISRSDYYCWCLDSI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03140 349 SMART exoiiiendus 127 301 IPR013520 -
Accr2g03140 349 CDD REX4_like 129 292 IPR037431 GO:0006364|GO:0008408
Accr2g03140 349 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 347 IPR047021 GO:0004527
Accr2g03140 349 FunFam RNA exonuclease 4 124 311 - -
Accr2g03140 349 SUPERFAMILY Ribonuclease H-like 141 297 IPR012337 -
Accr2g03140 349 Pfam Exonuclease 146 292 IPR013520 -
Accr2g03140 349 Gene3D - 125 313 IPR036397 GO:0003676
Accr2g03140 349 Coils Coil 346 349 - -
Accr2g03140 349 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Accr2g03140 349 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03140 Accr-Chr2 67235667 67237337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03140 3 349 C2H2 Transcription Factor Family AT3G27970 75.000 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03140 - - gmx:100813973 642.114