Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03115 ATGGACAAGAAACCGTACAATTCATCATCATCGTCATCATCTCAGGACCCAGAAGTGAGAAAAGGACCTTGGACCATGGAAGAAGACTTGATCTTGATCAACTATATAGCAAATCATGGTGAAGGTGTCTGGAACTCCTTGGCTAAAGCTGCTGGTCTTAAGCGAACCGGGAAGAGTTGTCGGCTCCGGTGGCTAAATTACCTTCGTCCTGATGTTAGAAGAGGGAATATTACACCAGAGGAACAACTTTTGATCATGGAGCTTCATTCAAAGTGGGGAAACAGGTGGTCAAAGATTGCGAAGCATCTACCAGGAAGAACTGATAATGAGATTAAGAACTATTGGAGGACTAGGATTCAGAAGCACATTAAGCAGGCCGAGAGTAGCTGCTCCCAGTCGCAGCAACATCAACAACACGCGCAGCTAAGTTCTGAGACGGCAGATCATCAGCAAGCCAGCAGCAGCCACGTGTCCAACACCATGGCTGATTCTCAGCCGATGGATACCTACTCTCCTTCCTCCTTTAATCATCAGGCTGCTCTCGCTGACCATCAGCCCTTCCCTACCAATCCCTTCCCCACCGTACTGGATCAGTCCTCCTTCAACTACTGGAGCATGGACGATCTCTGGCCTAATATGCAAATACTTAACGGCGATTAA 660 0.4773 MDKKPYNSSSSSSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHSKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAESSCSQSQQHQQHAQLSSETADHQQASSSHVSNTMADSQPMDTYSPSSFNHQAALADHQPFPTNPFPTVLDQSSFNYWSMDDLWPNMQILNGD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03115 219 Gene3D - 78 152 - -
Accr2g03115 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Accr2g03115 219 FunFam Myb-related protein 305 78 157 - -
Accr2g03115 219 CDD SANT 78 117 IPR001005 -
Accr2g03115 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Accr2g03115 219 CDD SANT 23 68 IPR001005 -
Accr2g03115 219 Gene3D - 21 73 - -
Accr2g03115 219 MobiDBLite consensus disorder prediction 1 19 - -
Accr2g03115 219 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Accr2g03115 219 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 175 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr2g03115 219 MobiDBLite consensus disorder prediction 1 21 - -
Accr2g03115 219 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Accr2g03115 219 MobiDBLite consensus disorder prediction 125 174 - -
Accr2g03115 219 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Accr2g03115 219 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Accr2g03115 219 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Accr2g03115 219 SMART sant 20 70 IPR001005 -
Accr2g03115 219 SMART sant 73 121 IPR001005 -
Accr2g03115 219 FunFam Myb transcription factor 21 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03115 Accr-Chr2 66785401 66789056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03115 1 219 MYB Transcription Factor Family AT3G01530 56.561 1.51e-79 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g03115 Myb_DNA-binding 7.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03115 K09422 - gmx:778046 295.434