Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03107 ATGGATTTTGAGCTTAACTTCCATGAAAGCTTCCCTCTGCTTTCTGGGCTTTTCCCAGAAAATCCCCCAAAATCTCAAGCGCTATCACTTGCAATGCCACACATTCATGATCAACCTCCTCCTCCTTCCCACAATAATCCTCCAGTACTGTTTCCCACCGACCAAAATCTCCACCACCACCACCATTTCCAACACTACCGTCACCATCAGCTGGATCTGAACGGGTCAGACCCCAATCCGATCTTCCTGAAGCAGGCTCCATATCCTTACTCTCATCATCCCGCCACTGTTCCTTTCGATTCTGCCTGTCCAAACGAGCCCTTCAAAGTCGACGCCTTGCATGGCGGTCGGGCCTTCTGGGATTTCTCGCCCAAGCTTTCTCTTCCATCCGACCCGTCCCTGGCCCCACAGATGGGCCCACTATACCATCCAGCTTATGGATCATCACCATTGAAGCCTAAGCCTCATCATCAGGACGAACTTCTTTTGTTCTTCCCTGAGAATCACAATGATCATAATGATCGCTGGCAAGACGAAGCTCGTGCTGATCATCACGATGACAGGAAGATGAAGAAGCAGCAGATGCACAAAGGCGGTATTCTCAAGAATACAAACATCATCAAAGGCCAGTGGACACCAGAAGAAGACAGAATTTTGGTGCAATTGGTGGAGAGGTTTGGGATGAAAAAATGGTCACAAGTCGCAAAGGCTTTGAATGGAAGAGTGGGAAAGCAGTGTAGAGAGAGGTGGCACAACCATCTGCGTCCGGACATTAGGAAGGAGGCATGGACCGAGGAAGAAGACATTATTCTGATCGAAGCTCACAAGGAAGTCGGCAACAAGTGGGCGGAAATCGCTCGCCGGCTTCCGGGACGGACGGAAAACACCATCAAGAACCACTGGAATGCCACAAAGCGCCGTCAAAACGCCAAGAGACACAGAAACAGAGGATCCACATCGAGGCCTTCACTTCTTCAGGAATACATCAAGCAAGTCACCACATGCCAAGGAACCTCAAGGCAGATTCAGATCAAACAAGAACAAGCCAACGAGCTGGTGTGCTATAACAACAATCGCATGATGAACAACGTGAGAGTTCGCTACGAAAGCGCCTCGGATGATGATGACGACAGCAGCTCCGGTGATTGGGAGGTTGATGTGTATGAGGCGGCGGAGGAAGACGGCGAGGAAGAGGAAGTGAAAGCAGCGTATGATAATGAGAATGATAATGGCGGAGAAGAGGAGGTGGCGGCGGAGATGAACGGGTTTGTGGGAGAGGATGGGATGAAGAAAGAGATGGAGCTGATGGAGATGATTTGTGGGCCCAAGAAGTACTGA 1338 0.5015 MDFELNFHESFPLLSGLFPENPPKSQALSLAMPHIHDQPPPPSHNNPPVLFPTDQNLHHHHHFQHYRHHQLDLNGSDPNPIFLKQAPYPYSHHPATVPFDSACPNEPFKVDALHGGRAFWDFSPKLSLPSDPSLAPQMGPLYHPAYGSSPLKPKPHHQDELLLFFPENHNDHNDRWQDEARADHHDDRKMKKQQMHKGGILKNTNIIKGQWTPEEDRILVQLVERFGMKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEEEDIILIEAHKEVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKRHRNRGSTSRPSLLQEYIKQVTTCQGTSRQIQIKQEQANELVCYNNNRMMNNVRVRYESASDDDDDSSSGDWEVDVYEAAEEDGEEEEVKAAYDNENDNGGEEEVAAEMNGFVGEDGMKKEMELMEMICGPKKY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03107 445 SMART sant 259 307 IPR001005 -
Accr2g03107 445 SMART sant 207 256 IPR001005 -
Accr2g03107 445 CDD SANT 262 305 IPR001005 -
Accr2g03107 445 SUPERFAMILY Homeodomain-like 205 301 IPR009057 -
Accr2g03107 445 ProSiteProfiles Myb-like domain profile. 203 254 IPR001005 -
Accr2g03107 445 CDD SANT 211 254 IPR001005 -
Accr2g03107 445 PANTHER MYB PROTEIN-RELATED 208 327 - -
Accr2g03107 445 ProSiteProfiles Myb-like domain profile. 255 305 IPR001005 -
Accr2g03107 445 FunFam Transcriptional activator Myb isoform A 207 260 - -
Accr2g03107 445 Gene3D - 261 327 - -
Accr2g03107 445 Pfam Myb-like DNA-binding domain 211 269 - -
Accr2g03107 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 258 IPR017930 -
Accr2g03107 445 MobiDBLite consensus disorder prediction 389 412 - -
Accr2g03107 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 309 IPR017930 -
Accr2g03107 445 Gene3D - 207 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03107 Accr-Chr2 66711197 66713426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03107 202 332 MYB Transcription Factor Family AT4G18770 70.229 2.48e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g03107 Myb_DNA-bind_6 3.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03107 K09422 - pvy:116107702 252.292