Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03098 ATGGCTTTTTCTAAAGATGAATGTGTTATACTCATCTTCTTAGTTGCGGGATGTATCAGTTTATTATTTCTTGGCTATATCTTTTGGCTATTTAACTATTATCGTGCTCTACACGATGCGCTTTTGAACCTCCTTCCCAGCTTCACCTACACCTCTTCCTCCTCCACCGCAGATGTGTGTGCGATATGCTTGACTGAGTTCAAAGAAGGAGATACAGGACGACTACTCCCAAACTGCAACCACATCTTTCATCACGGTTGCATCTATGAGTGGATCAAAAGAAGCAATACTGCTTGCCCATTGTGCCGAGAGGTTATCAATCCGAGAACCACATCACTGCATGAAAATATAGAAGCATCTCTTGGAGGAGAAGGTCAATTAGAGAATTCGCCGAATATAAATCTTCCTTCGACAATTTGGTGCCCCAGAAACACTCAACATGTTATTGTATTAAAGCAAGTGGCAATAGAGATTCCTGAGGAAGATAAGAGATAG 495 0.4141 MAFSKDECVILIFLVAGCISLLFLGYIFWLFNYYRALHDALLNLLPSFTYTSSSSTADVCAICLTEFKEGDTGRLLPNCNHIFHHGCIYEWIKRSNTACPLCREVINPRTTSLHENIEASLGGEGQLENSPNINLPSTIWCPRNTQHVIVLKQVAIEIPEEDKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03098 164 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Accr2g03098 164 Pfam Ring finger domain 59 103 IPR001841 -
Accr2g03098 164 ProSiteProfiles Zinc finger RING-type profile. 60 103 IPR001841 -
Accr2g03098 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 37 120 - -
Accr2g03098 164 SMART FANCL_C_2 56 111 - -
Accr2g03098 164 SUPERFAMILY RING/U-box 52 109 - -
Accr2g03098 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 109 IPR013083 -
Accr2g03098 164 SMART ring_2 60 102 IPR001841 -
Accr2g03098 164 SMART ringv_2 59 103 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03098 Accr-Chr2 66641657 66642151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03098 35 135 C3H Transcription Factor Family AT2G42360 37.500 2.55e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03098 - - pcin:129307892 129.413