Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03044 ATGTCGAAATCATTATACTTAACTCACGTATCGTTCCTCATATCCAATTCTAGAGCCATGGCTTCTGCAAGAGTTTTCTATTATGCGCTTCCACCTTCAAAATTCGCATCCTTCAACAAAGCAAACACTTTCTCCCTATCACCCTCCCTACGAACTTTCTCCACCACTCGAACGCCATATCCACTTCAGTACGAGATGATTATCAACCGTCCAGTCAATTCTGTGCATGCCCATTCTCGCCGGCGACCTGTTCGACAAAATGACTCCAATGCAGAGGGCTTCCCTGAATCCGAGAATCCGGAAGAGTCTGTTCCTCCAGAAGAGGCCGTTTCTGAATTGGGATTAGATAGCTGGGTTGATCGGAAATTGGCTTTCGAGAAAGCAGCTAACCAACCCCGTTCCCAAAAATTGGAGCTTGACAAGGCTAAGAGAAAATACTACAGAAAACGGAGTAAGAGGATGTATGGATCGGACTCTGATGAAGAAAATAGAGGACCTGAAGAGAAGTTCGTGGAACTGAAGCCTGAGGTGATAGAGCTTCCTACATTGCACAAGAGGGAGGAGGAATTGCATTTCTACGATGCGTTTTGTTACCCGTGGGAAAAGGAGAAGCATTATAAGATGGTCTATCAGTTGGAGAGGAAATATTTTCCTGATCAGTGTCTTGATAAGGCGTTCCTAGAACCGGGAGAATCAAATACAAAGACTAAGAGCAAGGTGAGAGGGGAAAAGAAGAAAGTAAGGGAAGAAGCAAAGGAGAAAAAAGACGCAACTAGTGATGAAAGAAATGATAAGAAGTTGATATTCTTCGAGGAGAAGCGAGAAGAAGAAAAGGATAACAGAGGATTGGTTAAGGAAACAAGAGAAGATCTAACCGAAAAGAAGGTCGAAGATTTCTTCAAGTATTTGAAGAAAATTCCGAATAAGGATGCTGAAGTGGGTAATGCTGAGCCGTTTCTTGCGTCAAGGAATTCTGGGCTTCCTCCAAGATGGGATGGTCCTCATGGAACCGTTGTTTTAGTGAATAAACCCAAAGGTTGGACTTCATTTACAGTTTGCGGAAAGCTGCGTCGCTTAGTCGAAGTGAAAAAGGTAGGTCATGCCGGAACTCTTGATCCAATGGCTACGGGTTTATTGATTGTTTGTGTTGGTAAAGCAACAAAAATAGTGGATAGATATCAAGGGATGATTAAGGGCTATAGTGGAGTTTTCCGCCTAGGGGAGGCTACTTCAACATGGGATGCTGATTCACCGGTCATTCAGCGTGAGCCATGGGAGCACATCAAAGAAGAGGACATAAAGAGAACTGCAGCATCCTTTTGTGGGGAGATTTGGCAAGTTCCCCCGATGTTCTCTGCTATTAAAGTTGGAGGTGAGAAAATGTACGACAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCTAGACGAATATCAATTTTCCAGTTTGACATAGAGCGTAGTTTGGATGATAGACAAAATTTGATTTTTAGGGTAACGTGTTCCAAAGGGACATATATTCGTTCACTATGTGCAGATTTTGGGAAAGCTCTTGGCAGTTGTGCCCATTTAACTGCTCTCCGGCGAGATTCAATAGGAGAATATTCAGCAGATGATGCATGGGACTTTGCAGAGCTGGAAGAGGCTATTTCCAAAAGTTATTTCTAA 1668 0.4323 MSKSLYLTHVSFLISNSRAMASARVFYYALPPSKFASFNKANTFSLSPSLRTFSTTRTPYPLQYEMIINRPVNSVHAHSRRRPVRQNDSNAEGFPESENPEESVPPEEAVSELGLDSWVDRKLAFEKAANQPRSQKLELDKAKRKYYRKRSKRMYGSDSDEENRGPEEKFVELKPEVIELPTLHKREEELHFYDAFCYPWEKEKHYKMVYQLERKYFPDQCLDKAFLEPGESNTKTKSKVRGEKKKVREEAKEKKDATSDERNDKKLIFFEEKREEEKDNRGLVKETREDLTEKKVEDFFKYLKKIPNKDAEVGNAEPFLASRNSGLPPRWDGPHGTVVLVNKPKGWTSFTVCGKLRRLVEVKKVGHAGTLDPMATGLLIVCVGKATKIVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKEEDIKRTAASFCGEIWQVPPMFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWDFAELEEAISKSYF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03044 555 SUPERFAMILY Pseudouridine synthase 337 549 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr2g03044 555 Gene3D Pseudouridine synthase 333 554 - -
Accr2g03044 555 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 215 553 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr2g03044 555 FunFam tRNA pseudouridine synthase B 332 554 - -
Accr2g03044 555 MobiDBLite consensus disorder prediction 75 109 - -
Accr2g03044 555 NCBIfam tRNA pseudouridine(55) synthase TruB 337 546 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr2g03044 555 CDD PseudoU_synth_EcTruB 338 549 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr2g03044 555 Hamap tRNA pseudouridine synthase B [truB]. 335 555 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Accr2g03044 555 Pfam tRNA pseudouridylate synthase B C-terminal domain 508 551 IPR032819 -
Accr2g03044 555 Pfam TruB family pseudouridylate synthase (N terminal domain) 357 507 IPR002501 GO:0006396
Accr2g03044 555 MobiDBLite consensus disorder prediction 234 259 - -
Accr2g03044 555 MobiDBLite consensus disorder prediction 232 259 - -
Accr2g03044 555 Coils Coil 237 257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03044 338 529 NAC Transcription Factor Family AT3G57150 33.333 7.47e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03044 K03177 - qsa:O6P43_004707 815.839