Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03022 ATGCCACACACTGAACTAGTTGCCCAAGACGTTCACAGGAGAATCAATGCATCTAGAAGAAACCTGGGGTACTTATCTTGCGGAACTGGGAACCCCATAGATGACTGCTGGCGATGTGACCCCAATTGGGACAAGAACCGGCAAAGGCTGGCCGATTGCGCCATTGGGTTCGGTAAGGACGCAGCCGGAGGAAGAAACGGCCGCATCTACGTGGTCTCGGACTCCGGGGACGACGACCCTGTGAACCCCAAGCCAGGTACTCTTAGACACGCTGTGATACAGGAGGAGCCACTGTGGATCATCTTCAACAGGGACATGGTGATCAACCTGAAGCAAGAGCTCATAATGAACTCCTTCAAGACCATCGACGGAAGAGGAGCGAGTGTTCACATCGCCGGCGGCGGCTGCATTACCCTCCATTACGTCAACAGCGTGATCATCCACGGCATTCACATCCACGACTGTAAGCCCACGGGGAACGCGGAGATTAGAGACTCTCCCACCCACTCAGGCTTCTGGACGGTGTCAGACGGAGACGGCATCTCCATTTTCAACTCGAAGCACATATGGGTGGACCACTGCTCCTTATCGAACTGCCACGACGGACTCATCGATGCCGTCCACGGATCCACGGCGATCACCATCTCCAACAACTACATGACGCATCACGACAAGGTGATGCTGTTGGGTCACAGCGACGAGTACACGCAGGACAGGGAGATGCAGGTGACGGTGGCGTTTAATCACTTCGGAGAAGGGCTGGTACAGAGAATGCCGAGGTGCAGGCACGGGTATTTTCACGTAGTGAACAACGATTACACGCACTGGGAAATGTACGCCATCGGAGGCAGTGCGGGTCCCACCATCAACAGCGAAGGGAACAGGTTTCTTGCGCCTGATAATAGGGCCAGCAAAGAAGTGACGAAGCGCGAGGAGGCTCCGGAGGGCGAGTGGAGAAACTGGAATTGGAGATCGGAAGGGGATCTTTTCTTGAACGGCGCTTTCTTCACGCAATCAGGTGCTGCTTCTGCTTCACCGTATGCTAGAGCGTCGAGTCTGAGTGCTAGGCCGTCTTCTCTGGTTGGCTCTATCACCATCTCTTCTGGTGCACTTATCTGCAGAAAGGGCACTCGTTGCTGA 1140 0.5482 MPHTELVAQDVHRRINASRRNLGYLSCGTGNPIDDCWRCDPNWDKNRQRLADCAIGFGKDAAGGRNGRIYVVSDSGDDDPVNPKPGTLRHAVIQEEPLWIIFNRDMVINLKQELIMNSFKTIDGRGASVHIAGGGCITLHYVNSVIIHGIHIHDCKPTGNAEIRDSPTHSGFWTVSDGDGISIFNSKHIWVDHCSLSNCHDGLIDAVHGSTAITISNNYMTHHDKVMLLGHSDEYTQDREMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSEGNRFLAPDNRASKEVTKREEAPEGEWRNWNWRSEGDLFLNGAFFTQSGAASASPYARASSLSARPSSLVGSITISSGALICRKGTRC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03022 379 SMART amb_all 105 302 IPR002022 -
Accr2g03022 379 FunFam Pectate lyase 30 372 - -
Accr2g03022 379 PANTHER PECTATE LYASE 18-RELATED 12 377 IPR045032 GO:0030570
Accr2g03022 379 Gene3D - 30 372 IPR012334 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 350 373 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 177 198 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 53 70 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 257 276 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 321 345 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 279 298 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 113 129 IPR018082 -
Accr2g03022 379 PRINTS Pollen allergen Amb family signature 77 102 IPR018082 -
Accr2g03022 379 Pfam Pectate lyase 114 296 IPR002022 -
Accr2g03022 379 SUPERFAMILY Pectin lyase-like 10 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g03022 Accr-Chr2 66035896 66037132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03022 5 379 Polysaccharide Lyase AT5G63180 76.253 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03022 K01728 - zju:107415231 684.1