Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g03010 ATGATGAACAGAGAACAAAGACGCAGCCCGAACAACCAAAACAACCCATCAAGAGAAACAAGGTCATCGGAAAATGGTGACAACTTGGGCGGAGTGTTCAGCCCCAGATTCAAATCTGCGGCTGCTTTGGCCGGTTGGGATGAGGAGTCCCTGCTATTCGCCAGCCTCGTCGTCCAAGACACTCCCGATAGAGTTTTGAAGAATGATAAACACTTTGATCTTAACATCAAGACTCCGACCTCCAATTCAAGAAGGAAACGCAGAGCTCAGAGGAGTCCACTTCCAATCCCTGTGACTGTTCTTGACCTTGAACAAGATGAAACTCCCAGAAAGGATAATGTAAAGAAGATGAAAGAAAACAGAACTACTGCTGACGAAGCGGGAGGGAATATTTTGACACAGAACAACTCTGGTTCTTCTTCTTCTGGATCTGCTCTCCCCTGTATCGATAAACTCAGGGAGGAGCTTTCCTGCGCTATTTGTCTGGAGATATGCTTTGAACCAAGTACTACTCCTTGTGGGCACAGCTTTTGCAGAAAATGCCTTCGATCTGCAGCGGATAAATGTGGAAGAAAGTGCCCGAAGTGCAGACAACTGATTAGTAATGGCCGATCTTGCAACGTGAACACAGTTCTTTGGAATACAATACAGCTCCTTTTTCCCAAAGAAGTGGAAGCAAGGAAAGCAGCAGGTGCCTTGAATAAACGAGAAGCTCAGCAGCGCACGATTTCAGAAACAGCATTTTATGACAACCTAAGTATTTCAACATTTGAGGGACCAGGCAGAAGTACAAGAAGTCAGAGGAGAAGAGTAGTGATCACAACAACAACCCAAGATGAGGATGAATATGCTGCATTGGCAATAAGGTTGCAGAGAGAGGAAAATGGGGTGGTTCAGAATAATAATAATAATTCAAGGAGCTTGACTTCATCTTCGTCATCGTCTTCTTCTTCAAGAGGGATATCAAGAAGAAGGATAACGAGCCAAGACGAGGATGCTGCTTTGGCTCTGAGGTTGCAGAGGGAAGAGTTTATGCAGGCTTTCAGGGGAAGCCAAGCACGTTCGGAAACAAGTGGGTCAATGTCAATGTCTTCAGCCAGAGCAAATTTGAGGGCCATGGCTTCTAGAGCAATCAATCTTCGAATTAGAGACCGAAGATCATGA 1164 0.4527 MMNREQRRSPNNQNNPSRETRSSENGDNLGGVFSPRFKSAAALAGWDEESLLFASLVVQDTPDRVLKNDKHFDLNIKTPTSNSRRKRRAQRSPLPIPVTVLDLEQDETPRKDNVKKMKENRTTADEAGGNILTQNNSGSSSSGSALPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGRKCPKCRQLISNGRSCNVNTVLWNTIQLLFPKEVEARKAAGALNKREAQQRTISETAFYDNLSISTFEGPGRSTRSQRRRVVITTTTQDEDEYAALAIRLQREENGVVQNNNNNSRSLTSSSSSSSSSRGISRRRITSQDEDAALALRLQREEFMQAFRGSQARSETSGSMSMSSARANLRAMASRAINLRIRDRRS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g03010 387 SMART ring_2 158 196 IPR001841 -
Accr2g03010 387 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Accr2g03010 387 PANTHER UNCHARACTERIZED 323 379 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 350 368 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 126 142 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 1 29 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 294 323 - -
Accr2g03010 387 SUPERFAMILY RING/U-box 150 221 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 74 142 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 1 31 - -
Accr2g03010 387 ProSiteProfiles Zinc finger RING-type profile. 158 197 IPR001841 -
Accr2g03010 387 Pfam Zinc finger, C3HC4 type (RING finger) 158 196 IPR018957 GO:0046872
Accr2g03010 387 MobiDBLite consensus disorder prediction 348 368 - -
Accr2g03010 387 MobiDBLite consensus disorder prediction 294 327 - -
Accr2g03010 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 227 IPR013083 -
Accr2g03010 387 MobiDBLite consensus disorder prediction 104 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g03010 158 212 RAD5 or RAD16-like Gene Family AT5G43530 37.288 4.27e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g03010 - - pcin:129302497 519.62