Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02987 ATGATCACTAAGCTTCTTCTCCGCCTGAGAGCTTTAGCCTTTTTGTTCTTCTGCCTCTTTGTCATTTCGCTTGGAGAAAAGCTTATCAGTTGCAACACAACATCCCCAGATGTTTCTGGCTACAGTTGCAGTAAAAATGAATCACAATGTGGAACATTTGCAGTTTTCTTCACAAATTCATACTACTCATCTCTCTTCAACTTGAGCTTTTACTTGGGGCTCAATCCTTATGTGATTGCAGATGCAAATGGGTTTTCTGCAGAAACGGAGTTTCTTCTTCATGACCAACCTTTACTAATACCAATAGACTGCAAATGCAAAGGTGGCTTCTTTGGCGCTGAAATAACCAAAACTACCATTAAAGGTGAGAACTTTTACGGTATTGCTCAATCGCTTGAAGGCTTAACAACCTGCATGGCTATTAGTGATAAGAATCCAGGTGTGTCACCTTGGGATCTCGATGATGACATCAGATTGCTGATTCCTCTGAGATGTGCATGTCCCTTATCACCTAAAGTTTCTCCAGAGCCGAAGCTTCTGATTTCTTACCCTGTGCTAGAAGGCGATACAATTCACAATTTGGCATCAAAGTTTAATACTACAGCTGAAGCAATAATCTCCGCAAATAACTTGTTCTCCAAAGATTTCAAACCTGAGAGGCTCACACCCTTTACCTCTCTTCTGATCCCACGGATTGGTAAGCCTGTTCTTGGTTCTCTGGCTAAACCCAACGAACCTGGTTCAGGTAATCGATCAAGCAACATTACACTAAATAAACCATCACCACACAGGAAGCCCAAAACGTGGAAGGCTGAATTGTACATTGGCCTAGCTGGGGTCGCAGTCGGAACTTTGTTTGCTTTTCTAGCAGCTTTTGTTGTGGTTCGATTGAGGAACGAGAAGAAAGAGAAATCATCATCAGCCAAAAGAAACAATTTGGAGCTGCAACATCTTAATATAAGCGTAAGAACCACCAGCGAGAAGAAAGTTTCGTTCGAGGGATCACAGTATGGGAAAATCATCGACACAACACCTCGTAAGATGCAGCTTGAGACATACACTATTGAAGATCTCATAAAAGCAACGGATGACTTCAGTTCAAATAATCTCATTGAAGGATCTGTATTTCATGGCCGTTTAGAAGGGAAGAACACGGCTATCAAACAAACAAACACAGAAACAGTGCTGAAAATCGATATTGGGCTCTTCCACAACTCAATCCACCATCACCCCAACATTCTCAGGATGCTTGGAACGTGTTTAACAGAAGGTCCAGAGTCATATCTGGTTTTCGAGTACGCAAAAAACGGGTCTTTAAAAGACTGGCTTCATGGTGGTTTAGCCATAAAGAACGAGTTCATATCATCCTGCTATTGCTTTCTCACATGGAGTCAGAGGCTCAGAATCTGCCTCGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAAGCCAAGCTATGTCCATAGAAACATAAAGAGCAGGAACATATTTCTGGATGAAGAATTTGGTGCCAAGATTGGGAATATTGGGATGGCAAGTTGTGTTGAGAACGACACAGAGGATCCCAAGTTCTATTCAACCAACCCTGCTTCTTGGAATCTTGGTTATCTGGCACCAGAATATGTACACCAAGGTGTGATTTCTCCAAGTTCTGATATTTTTGCTTATGGGGTGGTTTTGCTGGAGATTTTGTCTGGTCAGACACCTATAAGCAGACCCAATGAGAAGGGAGAAGGAAGTGTTTGGCTCACTGATAAAATAAAGTCTGTTTTGGAGTTAGGAAATGAGGAAGAACTCAGAGGGTGGATGGATAAGGCATTGGGTGAGAATTATTCATTGGATGCAGCAGTAACAGTGGCGAATATTGCTAGGGCTTGCGTGGAGGAAGATTATAGTATGAGGCCAAGTGCAGGGGAAGTTGTGGAGAAGCTAACCATATTGATCGAGGAACTTGCAGAAGAAGATCACATGTTGATGTCTGAAAGTTCTTGCAAGCCCCTGGTTAAAGCACTGAAAAAGCAGTGA 2031 0.4264 MITKLLLRLRALAFLFFCLFVISLGEKLISCNTTSPDVSGYSCSKNESQCGTFAVFFTNSYYSSLFNLSFYLGLNPYVIADANGFSAETEFLLHDQPLLIPIDCKCKGGFFGAEITKTTIKGENFYGIAQSLEGLTTCMAISDKNPGVSPWDLDDDIRLLIPLRCACPLSPKVSPEPKLLISYPVLEGDTIHNLASKFNTTAEAIISANNLFSKDFKPERLTPFTSLLIPRIGKPVLGSLAKPNEPGSGNRSSNITLNKPSPHRKPKTWKAELYIGLAGVAVGTLFAFLAAFVVVRLRNEKKEKSSSAKRNNLELQHLNISVRTTSEKKVSFEGSQYGKIIDTTPRKMQLETYTIEDLIKATDDFSSNNLIEGSVFHGRLEGKNTAIKQTNTETVLKIDIGLFHNSIHHHPNILRMLGTCLTEGPESYLVFEYAKNGSLKDWLHGGLAIKNEFISSCYCFLTWSQRLRICLDVAMALQYMHHVMKPSYVHRNIKSRNIFLDEEFGAKIGNIGMASCVENDTEDPKFYSTNPASWNLGYLAPEYVHQGVISPSSDIFAYGVVLLEILSGQTPISRPNEKGEGSVWLTDKIKSVLELGNEEELRGWMDKALGENYSLDAAVTVANIARACVEEDYSMRPSAGEVVEKLTILIEELAEEDHMLMSESSCKPLVKALKKQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02987 676 ProSiteProfiles Protein kinase domain profile. 326 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g02987 676 MobiDBLite consensus disorder prediction 239 266 - -
Accr2g02987 676 ProSiteProfiles LysM domain profile. 181 229 IPR018392 -
Accr2g02987 676 Gene3D Transferase(Phosphotransferase) domain 1 434 667 - -
Accr2g02987 676 MobiDBLite consensus disorder prediction 245 261 - -
Accr2g02987 676 Pfam LysM domain 185 230 IPR018392 -
Accr2g02987 676 FunFam PTI1-like tyrosine-protein kinase 3 434 660 - -
Accr2g02987 676 Pfam Protein tyrosine and serine/threonine kinase 399 646 IPR001245 GO:0004672|GO:0006468
Accr2g02987 676 SMART LysM_2 182 230 IPR018392 -
Accr2g02987 676 Gene3D Phosphorylase Kinase; domain 1 338 433 - -
Accr2g02987 676 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 652 - -
Accr2g02987 676 CDD LysM 181 229 IPR018392 -
Accr2g02987 676 SUPERFAMILY LysM domain 181 222 IPR036779 -
Accr2g02987 676 SUPERFAMILY Protein kinase-like (PK-like) 342 647 IPR011009 -
Accr2g02987 676 Gene3D LysM domain 180 230 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02987 Accr-Chr2 65738820 65740850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02987 40 671 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.848 1.41e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr2g02987 PK_Tyr_Ser-Thr 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02987 - - gmx:100816082 937.176