Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g02982 ATGCCTGACTACGTGATCGAGGGTGCTTCAGGGCCTCATTTCTCCGGCCTACGCCTTGACGGTCTCCCTTCTTCTCTACCTTCTCCATATACGTCTCCTGTCCATCGTTTCTCTGCTTCTGCCACCTTAGCCCCTGATTCTTCTCATGAACAACCTTTCGTTATTGGAGTTTCGGGAGGTACTGCTTCCGGTAAGACCACTGTATGTAATATGATTATCCAGCAGCTTCACGATCATCGAGTCGTGCTTGTCAATCAGGATTCATTTTATCGTGGTTTGACTCCTTCAGAGATGGAACGCGTGCAAGAGTACAATTTTGATCATCCCGACGCTTTTGACACCGAGCAGCTTTTAGATTGCATGCAAAAGCTACTAGGCGGCCACAGCGTCCAAGTCCCAGTTTATGACTTTAAGAAACACCAGCGCTCTACTGTTACCTTTCGACAGGTCAATGCTTCTGATGTCATTATATTAGAAGGAATTCTTGTTTTCCATGAACAACGAGTCCGTGATCTGATGAACCTGAAAATTTTTGTTGATTCAGATGCGGATGTAAGACTTGCCCGTAGAATTAGACGTGATACAGTGGAAAGAGGTAGGGATGTATGCTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTTCTTTTGATGATTTTATTCATCCATCAAAGAAGTATGCTGATGTGATCATTCCACGGGGAAGTGATAATCAAGTTGCCATTGATCTGATTGTACAACATATCCAGACAAAACTTGGTCAACATGATCTGTGCAAGATTTACTCTAATCTGTATGTTATTCAGTCAACATTCCAGATCCGAGGAATGCATACATTGATCCGTGATCGAGACATATCAAAGCATGATTTCGCGTTTTACTCAGATAGACTTATACGGCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCATTCACCGAAAAGCAAGTAGTTACTCCAACAGGATCTATCTATACTGGAGTTGACTTCTGCAAGAAACTGTGTGGTGTTTCAATTATTCGAAGTGGTGAGAGCATGGAAAATGCGCTACGTGCATGTTGCAAAGGTATTAAAATTGGCAAAATTCTGATTCACCGACATGGGGACCACGGAAAACAGCTAATATATGAGAAGCTTCCCCGGGACATTTCAGAACGTCATATTTTGCTTCTTGACCCTGTCCTTGCTACAGGTAATTCAGCAAGCCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCGGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCCGAGGGGATCCAATGTGTGTGTAAAAGGTTTCCGTCCTTGAAAATCGTAACATCTGAGATTGACGCTGGCCTAAACGAAGTGTCCCGTGTAATTCCCGGAATGGGCGAGTTTGGTGATCGCTACTTTGGTACCGATGATTACTCACATAACAAACAATGA 1440 0.4347 MPDYVIEGASGPHFSGLRLDGLPSSLPSPYTSPVHRFSASATLAPDSSHEQPFVIGVSGGTASGKTTVCNMIIQQLHDHRVVLVNQDSFYRGLTPSEMERVQEYNFDHPDAFDTEQLLDCMQKLLGGHSVQVPVYDFKKHQRSTVTFRQVNASDVIILEGILVFHEQRVRDLMNLKIFVDSDADVRLARRIRRDTVERGRDVCSVLEQYAKFVKPSFDDFIHPSKKYADVIIPRGSDNQVAIDLIVQHIQTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSIYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRHGDHGKQLIYEKLPRDISERHILLLDPVLATGNSASQAIELLIQKGVPESHIIFLNLISAPEGIQCVCKRFPSLKIVTSEIDAGLNEVSRVIPGMGEFGDRYFGTDDYSHNKQ 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g02982 479 PANTHER URIDINE KINASE 47 381 - -
Accr2g02982 479 PRINTS Uridine kinase signature 52 69 - -
Accr2g02982 479 PRINTS Uridine kinase signature 82 93 - -
Accr2g02982 479 PRINTS Uridine kinase signature 220 233 - -
Accr2g02982 479 PRINTS Uridine kinase signature 127 142 - -
Accr2g02982 479 PRINTS Uridine kinase signature 184 194 - -
Accr2g02982 479 PRINTS Uridine kinase signature 198 209 - -
Accr2g02982 479 SUPERFAMILY PRTase-like 255 472 IPR029057 -
Accr2g02982 479 Pfam Uracil phosphoribosyltransferase 270 471 - -
Accr2g02982 479 NCBIfam uridine kinase 50 253 IPR000764 -
Accr2g02982 479 FunFam Uridine kinase 49 255 - -
Accr2g02982 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 245 IPR027417 -
Accr2g02982 479 CDD UMPK 54 252 IPR000764 -
Accr2g02982 479 Gene3D - 256 471 IPR029057 -
Accr2g02982 479 Gene3D - 48 255 IPR027417 -
Accr2g02982 479 Pfam Phosphoribulokinase / Uridine kinase family 54 241 IPR006083 GO:0005524|GO:0016301
Accr2g02982 479 FunFam Uridine kinase 256 471 - -
Accr2g02982 479 CDD PRTases_typeI 329 444 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g02982 Accr-Chr2 65700009 65705554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g02982 3 473 PRT Gene Family AT5G40870 81.723 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g02982 K00876 - thj:104825615 806.594